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Name : NGO1930 (NGO1930) Accession : YP_208955.1 Strain : Neisseria gonorrhoeae FA 1090 Genome accession: NC_002946 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1905223 - 1907817 bp Length : 2595 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGTCCAAATCCGCCGTTTCCCCAATGATGCAGCAATACCTCGGCATAAAAGCGCAACATACCGACAAACTAGTGTTTTA CCGTATGGGTGATTTTTACGAGCTGTTTTTGGATGACGCGGTGGAAGCGGCGAAATTGTTGGACATCACCCTGACCACAC GCGGGCAGATGGACGGCGTGCCGATTAAAATGGCAGGCGTTCCGTTTCACGCGGCGGAACAGTATCTGGCGCGCCTGGTC AAGTTGGGCAAAAGCGTGGCGATTTGCGAACAGGTCGGCGAAGTCGGCGCGGGCAAAGGGCCGGTGGAGCGCAAAGTCGT GCGCATCGTAACGCCCGGCACGCTAACCGATTCCGCATTACTGGAAGACAAGGAAACCAACCGCATCGTTGCCGTGTCTC CCGACAAAAAATACATCGGTTTGGCGTGGGCATCGCTGCAAAGCGGCGAATTCAAAACCAAGCTGACAACTGCGGATAAA TTGAACGACGAACTGGCGCGCCTGCAGGCGGCGGAAATTTTGCTGCCGGACAGTAAAAACGCACCGCAACTTCAGACGGC ATCGGGTGTTACACGCCTGAACGCGTGGCAGTTTGCCGCCGACGCGGGGGAAAAACTGCTGACGGAATATTTCGGCTGCC AAGATTTGCGCGGCTTCGGTTTGGACAGCAAAGAACACGCCGTTTCGATTGGCGCGGCAGGTGCGCTGTTGAACTATATC CGCCTGACGCAAAACCTGATGCCGCAACATTTGGACGGCCTGTCGCTCGAAACCGACAGCCAATATATCGGCATGGATGC CGCCACGCGCCGCAATCTCGAAATCACGCAAACCCTCTCCGGCAAAAAAACGCCGACCCTGTTTTCCATACTCGACGGCT GCGCCACCCACATGGGCAGCCGCCTGTTGGCATTGTGGCTGCACCACCCTTTACGCAACCGCGCCCACATCCGAGCGCGC CAAGAAGCCGTAACCGCGCTGGAAAGCCAATACGAACCCCTCCAATGCCATCTGAAGAGCATTGCCGACATCGAACGTAT CGCCGCCCGCATCGCCGTCGGCAATGCCCGCCCGCGCGATTTGGCATCTTTACGCGACAGTCTGTTCGAGTTGGCACAAA TCGACTTGTCCGCAACCGGCAGCAGCCTGTTGGAAACCCTTAAAGCCGTTTTCCCCGAAACCCTGCCCGTTGCCGAAACC CTCAAAGCCGCCGTGATGCCCGAACCTTCCGTCTGGCTGAAAGACGGCAATGTCATCAACCACGGTTTTCATCCCGAACT GGACGAATTGCGCCGCATTCAAAACCATGGCGACGAATTTTTGCTGGATTTGGAAGCCAAGGAACGCGAACGTACCGGTT TGTCCACACTCAAAGTCGAGTTCAACCGCGTTCACGGCTTTTACATTGAATTGTCCAAAACCCAAGCCGAACAAGCACCT GCCGACTACCAACGCCGGCAAACCCTCAAAAACGCCGAACGCTTCATCACGCCGGAACTGAAAGCCTTTGAAGACAAAGT GCTGACTGCTCAAGACCAAGCCCTCGCCTTAGAAAAACAACTCTTTGACGGCGTATTGAAAAACCTTCGGACGGCATTGC CGCAGCTTCAAAAAGCCGCCAAAGCCGCCGCCGCGCTGGACGTGTTATCCACATTTTCAGCCTTGGCAAAAGAGCGGAAC TTTGTCCGTCCCGAGTTTGCCGACTATCCGGTTGTCCACATCGAAAACGGCCGCCATCCCGTTGTCGAACAGCAGGTACG CCACTTCACAGCCAACCACACCGACCTCGACCACAAACACCGCCTCATGCTGCTCACCGGCCCCAATATGGGCGGCAAAT CCACCTATATGCGCCAAGTCGCGCTGATTGTTTTATTGGCACACACCGGCTGTTTCGTGCCTGCCGATGCCGCCACAATC GGGCCTGTCGATCAAATCTTCACCCGCATCGGCGCATCGGACGACCTCGCCTCCAACCGCTCCACCTTCATGGTCGAAAT GAGCGAAACCGCCTACATCCTGCATCACGCCACCGAACAAAGCATTGTTTTAATGGACGAAGTCGGACGTGGTACTTCCA CTTTCGACGGCCTCGCCCTCGCGCACGCAATCGCCGAACACCTGCTGCAAAAAAACAAATCCTTCAGCCTGTTTGCCACC CACTATTTCGAGCTGACCTACCTGCCCGAAGCCCACGCCGCCGCCGTCAATATGCACCTTTCCGCGCTCGAACAGGGACG GGACATCGTGTTCCTGCACCAAATCCAACCCGGTCCCGCCGGAAAAAGCTACGGCATCGCCGTCGCCAAACTCGCCGGCC TGCCTGTGCGCGCATTGAAAGCCGCCCAAAAGCATTTGAACGGACTGGAAAACCAAGCCGCCGCAAACCGTCCCCAACTG GATATTTTCAGTACCATGCCGTCTGAAAAAGGAGATGAACCGAATGTGGACTGCTTTGTGGATAAAGCAGAGGAAAAACA TTTTGAAGGTATATTGGCAGCAGCCCTGGAAAACCTCGATCCCGACAGCCTGACCCCGCGCGAAGCATTGTCAGAACTGT ACCGTCTGAAAGATTTGTGCAAATCCGTATCTTAA Protein sequence : MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYELFLDDAVEAAKLLDITLTTRGQMDGVPIKMAGVPFHAAEQYLARLV KLGKSVAICEQVGEVGAGKGPVERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTADK LNDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRGFGLDSKEHAVSIGAAGALLNYI RLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEITQTLSGKKTPTLFSILDGCATHMGSRLLALWLHHPLRNRAHIRAR QEAVTALESQYEPLQCHLKSIADIERIAARIAVGNARPRDLASLRDSLFELAQIDLSATGSSLLETLKAVFPETLPVAET LKAAVMPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTGLSTLKVEFNRVHGFYIELSKTQAEQAP ADYQRRQTLKNAERFITPELKAFEDKVLTAQDQALALEKQLFDGVLKNLRTALPQLQKAAKAAAALDVLSTFSALAKERN FVRPEFADYPVVHIENGRHPVVEQQVRHFTANHTDLDHKHRLMLLTGPNMGGKSTYMRQVALIVLLAHTGCFVPADAATI GPVDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSIVLMDEVGRGTSTFDGLALAHAIAEHLLQKNKSFSLFAT HYFELTYLPEAHAAAVNMHLSALEQGRDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKAAQKHLNGLENQAAANRPQL DIFSTMPSEKGDEPNVDCFVDKAEEKHFEGILAAALENLDPDSLTPREALSELYRLKDLCKSVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 2e-167 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NGO1930 | YP_208955.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 8e-178 | 50 |
