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Name : NGO1265 (NGO1265) Accession : YP_208336.1 Strain : Neisseria gonorrhoeae FA 1090 Genome accession: NC_002946 Putative virulence/resistance : Unknown Product : TspB-like protein Function : - COG functional category : A : RNA processing and modification COG ID : COG5186 EC number : - Position : 1219308 - 1220831 bp Length : 1524 bp Strand : - Note : Best Blastp Hit: gb|AAF42090.1| (AE002524) tspB protein, [Neisseria meningitidis MC58]; protein TspB3 DNA sequence : ATGATGTATTCGTTTGAAGCGAATGCAAATGCAGTAAAAATATCTGAAACTCTTTCGGTTGATACCGGACAAGGCGCGAA AGTTCATAAGTTCGTTCCTAAATCAAGTAATATTTATTCATCTGATTTAACAAAAGCGGTAGATTTAACGCATATCCCCA CGGGCGCAAAAGCCCGAATCAACGCCAAAATAACCGCCAGCGTATCCCGCGCCGGCGTATTGTCGGGGGTCGGCAAACTT GTCCGCCAAGGCGCGAAATTCGGCACAAGGGCGGTTCCCTATGTCGGAACAGCCCTTTTAGCCCACGACGTATACGAAAC TTTCAAAGAAGACATACAGGCACGAGGCTGCCGATACGATCCCGAAACCGACAAATTTGTAAAAGGCTACGAATATGCTA ATTGCCTTTGGTACGAAGACGAAAGACGTATTAATAGAACCTATGGCTGCTACGGCGTTGACAGTTCGATTATGCGCCTT ATGCCCGATCGCAGCAGATTCCCCGAAGTCAAACAACTGATGGAAAGCCAAATGTATAGGCTGGCACGTCCGTTTTGGAA TTGGCGTAAAGAAGAACTGAATAAATTAAGTTCTTTGGATTGGAATAATTTTGTTTTAAATCGTTGCACATTTGATTGGA ACGGCGGAGGTTGTGCGGTCAATAAAGGTGATGATTTCAGAGCTGGGGCTTCTTTTTCCCTTGGCCGCAATCCGAAATAC AAAGAAGAAATGGATGCCAAAAAGCCGGAAGAGATTTTATCGTTGAAAGTCGATGCCGATCCCGACAAATACATAGAGGC AACCGGATATCCCGGTTATTCCGAAAAAGTAGAAGTCGCACCCGGAACAAAAGTGAATATGGGGCCCGTCACGGACAGGA ACGGGAATCCCGTTCAGGTTGCCGCAACATTCGGCAGGGACGCGCAAGGCAACACCACGGCGGATGTTCAAGTAATCCCG CGTCCCGACCTCACGCCCGCAAGCGCGGAAGCACCTCACGCACAGCCGCTGCCCGAAGTATCGCCCGCGGAAAACCCCGC AAACAACCCGGACCCCGATGAGAACCCCGGCACGCGTCCCAATCCCGAACCCGACCCCGATTTGAATCCCGATGCAAATC CCGATACGGACGGACAGCCCGGAACAAGCCCCGATTCCCCGGCCGTTCCGGACCGCCCAAACGGCAGGCATCGCAAAGAA AGGAAAGAAGGCGAAGACGGCGGGCTTTCGTGCGATTATTTTCCGGAAATCCTAGCCTGTCAGGAGATGGGCAAACCTTC GGACCGCATGTTTCACGATATAAGCATACCGCAGGTTACAGACGATAAAACATGGTCTTCACATAACTTTTTACCGTCTA ACGGCGTATGTCCGCAGCCGAAAACCTTTCATGTTTTCGGCAGGCAATATCGGGCAAGCTATGAACCGTTGTGCGTGTTT GCCGAAAAAATCCGGTTTGCCGTACTGCTCGCCTTTATCATTATGTCGGCTTTTGTCGTTTTCGGTTCGTTGGGGGGGGA ATAA Protein sequence : MMYSFEANANAVKISETLSVDTGQGAKVHKFVPKSSNIYSSDLTKAVDLTHIPTGAKARINAKITASVSRAGVLSGVGKL VRQGAKFGTRAVPYVGTALLAHDVYETFKEDIQARGCRYDPETDKFVKGYEYANCLWYEDERRINRTYGCYGVDSSIMRL MPDRSRFPEVKQLMESQMYRLARPFWNWRKEELNKLSSLDWNNFVLNRCTFDWNGGGCAVNKGDDFRAGASFSLGRNPKY KEEMDAKKPEEILSLKVDADPDKYIEATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVAATFGRDAQGNTTADVQVIP RPDLTPASAEAPHAQPLPEVSPAENPANNPDPDENPGTRPNPEPDPDLNPDANPDTDGQPGTSPDSPAVPDRPNGRHRKE RKEGEDGGLSCDYFPEILACQEMGKPSDRMFHDISIPQVTDDKTWSSHNFLPSNGVCPQPKTFHVFGRQYRASYEPLCVF AEKIRFAVLLAFIIMSAFVVFGSLGGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB1747 | NP_274748.1 | tspB protein | Not tested | IHT-C | Protein | 2e-180 | 85 |
| tspB | YP_001598322.1 | TspB protein | Not tested | MDA | Protein | 1e-133 | 73 |
