|
Name : NGO1167 (NGO1167) Accession : YP_208245.1 Strain : Neisseria gonorrhoeae FA 1090 Genome accession: NC_002946 Putative virulence/resistance : Unknown Product : TspB-like protein Function : - COG functional category : A : RNA processing and modification COG ID : COG5186 EC number : - Position : 1106359 - 1107939 bp Length : 1581 bp Strand : - Note : Best Blastp Hit: gb|AAF42090.1| (AE002524) tspB protein, [Neisseria meningitidis MC58]; protein TspB2 DNA sequence : ATGGTCACAAAACATACAAATTTGAATTTTGCGAAATTGTCGATAATTGCAATTTTGATGATGTATTCGTTTGAAGCGAA TGCAAATGCAGTAAAAATATCTGAAACTCTTTCGGTTGATACCGGACAAGGCGCGAAAGTTCATAAGTTCGTTCCTAAAT CAAGTAATATTTATTCATCTGATTTAACAAAAGCGGTAGATTTAACGCATATCCCCACGGGCGCAAAAGCCCGAATCAAC GCCAAAATAACCGCCAGCGTATCCCGCGCCGGCGTATTGTCGGGGGTCGGCAAACTTGTCCGCCAAGGCGCGAAATTCGG CACAAGGGCGGTTCCCTATGTCGGAACAGCCCTTTTAGCCCACGACGTATACGAAACTTTCAAAGAAGACATACAGGCAC GAGGCTGCCGATACGATCCCGAAACCGACAAATTTGTAAAAGGCTACGAATATGCTAATTGCCTTTGGTACGAAGACGAA AGACGTATTAATAGAACCTATGGCTGCTACGGCGTTGACAGTTCGATTATGCGCCTTATGCCCGATCGCAGCAGATTCCC CGAAGTCAAACAACTGATGGAAAGCCAAATGTATAGGCTGGCACGTCCGTTTTGGAATTGGCGTAAAGAAGAACTGAATA AATTAAGTTCTTTGGATTGGAATAATTTTGTTTTAAATCGTTGCACATTTGATTGGAACGGCGGAGGTTGTGCGGTCAAT AAAGGTGATGATTTCAGAGCTGGGGCTTCTTTTTCCCTTGGCCGCAATCCGAAATACAAAGAAGAAATGGATGCCAAAAA GCCGGAAGAGATTTTATCGTTGAAAGTCGATGCCGATCCCGACAAATACATAGAGGCAACCGGATATCCCGGTTATTCCG AAAAAGTAGAAGTCGCACCCGGAACAAAAGTGAATATGGGGCCCGTCACGGACAGGAACGGGAATCCCGTTCAGGTTGCC GCAACATTCGGCAGGGACGCGCAAGGCAACACCACGGCGGATGTTCAAGTAATCCCGCGTCCCGACCTCACGCCCGCAAG CGCGGAAGCACCTCACGCACAGCCGCTGCCCGAAGTATCGCCCGCGGAAAACCCCGCAAACAACCCGGACCCCGATGAGA ACCCCGGCACGCGTCCCAATCCCGAACCCGACCCCGATTTGAATCCCGATGCAAATCCCGATACGGACGGACAGCCCGGA ACAAGCCCCGATTCCCCGGCCGTTCCGGACCGCCCAAACGGCAGGCATCGCAAAGAAAGGAAAGAAGGCGAAGACGGCGG GCTTTCGTGCGATTATTTTCCGGAAATCCTAGCCTGTCAGGAGATGGGCAAACCTTCGGACCGCATGTTTCACGATATAA GCATACCGCAGGTTACAGACGATAAAACATGGTCTTCACATAACTTTTTACCGTCTAACGGCGTATGTCCGCAGCCGAAA ACCTTTCATGTTTTCGGCAGGCAATATCGGGCAAGCTATGAACCGTTGTGCGTGTTTGCCGAAAAAATCCGGTTTGCCGT ACTGCTCGCCTTTATCATTATGTCGGCTTTTGTCGTTTTCGGTTCGTTGGGGGGGGAATAA Protein sequence : MVTKHTNLNFAKLSIIAILMMYSFEANANAVKISETLSVDTGQGAKVHKFVPKSSNIYSSDLTKAVDLTHIPTGAKARIN AKITASVSRAGVLSGVGKLVRQGAKFGTRAVPYVGTALLAHDVYETFKEDIQARGCRYDPETDKFVKGYEYANCLWYEDE RRINRTYGCYGVDSSIMRLMPDRSRFPEVKQLMESQMYRLARPFWNWRKEELNKLSSLDWNNFVLNRCTFDWNGGGCAVN KGDDFRAGASFSLGRNPKYKEEMDAKKPEEILSLKVDADPDKYIEATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVA ATFGRDAQGNTTADVQVIPRPDLTPASAEAPHAQPLPEVSPAENPANNPDPDENPGTRPNPEPDPDLNPDANPDTDGQPG TSPDSPAVPDRPNGRHRKERKEGEDGGLSCDYFPEILACQEMGKPSDRMFHDISIPQVTDDKTWSSHNFLPSNGVCPQPK TFHVFGRQYRASYEPLCVFAEKIRFAVLLAFIIMSAFVVFGSLGGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB1747 | NP_274748.1 | tspB protein | Not tested | IHT-C | Protein | 0.0 | 85 |
| tspB | YP_001598322.1 | TspB protein | Not tested | MDA | Protein | 7e-134 | 73 |
