Gene Information

Name : MAP0834c (MAP0834c)
Accession : NP_959768.1
Strain : Mycobacterium avium K-10
Genome accession: NC_002944
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 851908 - 852609 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGGACACAGCAGCTAGCTCACCGCGGGTCTTGGTCGTCGACGACGACTCCGATGTGCTCGCGTCGCTGGAACGTGGCCT
GCGACTGTCCGGATTCGAGGTGTCCACCGCGGTCGACGGCGCCGAGGCGCTGCGCAGCGCCACCGAGACACGCCCGGACG
CGATCGTGCTCGACATCAACATGCCGGTGCTGGACGGCGTCAGCGTCGTCACCGCGCTGCGCGCCATGGACAACGACGTC
CCCGTCTGCGTGCTGTCGGCCCGCAGCTCGGTCGACGACCGGGTGGCGGGCCTGGAGGCCGGGGCCGACGACTACCTGGT
CAAGCCGTTCGTGCTGGCCGAGCTGGTCGCGCGGGTCAAGGCGCTGCTGCGCCGCCGCGGCGCCACCGCCACCTCCTCGT
CGGAAACGATCACGGTGGGCCCGCTGGAGGTCGACATCCCCGGCCGCCGCGCCCGGGTCAACGGCGTGGACGTCGATTTG
ACCAAGCGGGAGTTCGACCTGCTGGCGGTCCTGGCCGAGCACAAGACCGCCGTGCTGTCCCGCGCACAACTGCTGGAGCT
GGTGTGGGGCTATGACTTCGCCGCCGACACCAACGTCGTCGACGTGTTCATCGGATACCTGCGCCGCAAGCTCGAGGCCA
ACGGCGGGCCCCGGCTGCTGCACACCGTCCGCGGAGTGGGATTCGTGCTGCGCATGCAGTAA

Protein sequence : 
MDTAASSPRVLVVDDDSDVLASLERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDV
PVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGATATSSSETITVGPLEVDIPGRRARVNGVDVDL
TKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-25 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MAP0834c NP_959768.1 hypothetical protein BAC0083 Protein 1e-30 45
MAP0834c NP_959768.1 hypothetical protein BAC0125 Protein 5e-30 44
MAP0834c NP_959768.1 hypothetical protein BAC0197 Protein 2e-24 44
MAP0834c NP_959768.1 hypothetical protein AE000516.2.gene3505. Protein 5e-29 44
MAP0834c NP_959768.1 hypothetical protein BAC0638 Protein 8e-24 43
MAP0834c NP_959768.1 hypothetical protein NC_012469.1.7685629. Protein 5e-27 43
MAP0834c NP_959768.1 hypothetical protein HE999704.1.gene1528. Protein 1e-30 42
MAP0834c NP_959768.1 hypothetical protein NC_002952.2859905.p0 Protein 5e-27 42
MAP0834c NP_959768.1 hypothetical protein NC_007622.3794472.p0 Protein 5e-27 42
MAP0834c NP_959768.1 hypothetical protein NC_009641.5332272.p0 Protein 8e-27 42
MAP0834c NP_959768.1 hypothetical protein NC_013450.8614421.p0 Protein 8e-27 42
MAP0834c NP_959768.1 hypothetical protein NC_007793.3914279.p0 Protein 8e-27 42
MAP0834c NP_959768.1 hypothetical protein NC_002745.1124361.p0 Protein 8e-27 42
MAP0834c NP_959768.1 hypothetical protein NC_009782.5559369.p0 Protein 8e-27 42
MAP0834c NP_959768.1 hypothetical protein NC_002951.3237708.p0 Protein 8e-27 42
MAP0834c NP_959768.1 hypothetical protein NC_003923.1003749.p0 Protein 7e-27 42
MAP0834c NP_959768.1 hypothetical protein NC_002758.1121668.p0 Protein 8e-27 42
MAP0834c NP_959768.1 hypothetical protein HE999704.1.gene2815. Protein 2e-26 42
MAP0834c NP_959768.1 hypothetical protein BAC0308 Protein 1e-27 41
MAP0834c NP_959768.1 hypothetical protein BAC0347 Protein 9e-24 41
MAP0834c NP_959768.1 hypothetical protein BAC0111 Protein 9e-26 41
MAP0834c NP_959768.1 hypothetical protein NC_012469.1.7686381. Protein 1e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MAP0834c NP_959768.1 hypothetical protein VFG1389 Protein 3e-82 99
MAP0834c NP_959768.1 hypothetical protein VFG1390 Protein 3e-41 50
MAP0834c NP_959768.1 hypothetical protein VFG1386 Protein 3e-36 46
MAP0834c NP_959768.1 hypothetical protein VFG0596 Protein 1e-25 42