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Name : clpC (MAP0461) Accession : NP_959395.1 Strain : Mycobacterium avium K-10 Genome accession: NC_002944 Putative virulence/resistance : Virulence Product : ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 488298 - 490829 bp Length : 2532 bp Strand : + Note : - DNA sequence : ATGTTTGAACGATTTACCGACCGCGCCCGCAGGGTCGTCGTCTTGGCGCAAGAAGAGGCCCGGATGCTCAACCACAACTA CATCGGCACCGAGCACATCCTGCTGGGTTTGATCCACGAGGGCGAGGGCGTGGCGGCCAAGTCGCTGGAGTCGCTGGGCA TCTCGCTGGAGGGCGTCCGCAGCCAGGTCGAGGAGATCATCGGCCAGGGCCAGCAGGCGCCGTCCGGACACATCCCGTTC ACCCCGCGCGCCAAGAAGGTGCTGGAGCTGAGCCTGCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCA CATCCTGCTGGGCCTGATCCGCGAGGGTGAGGGCGTGGCCGCCCAGGTGCTGGTCAAGCTGGGCGCCGAGCTGACCCGGG TGCGCCAGCAGGTGATCCAGCTGCTCTCCGGCTACCAAGGCAAGGAGGCCGCCGAGGCCGGCACCGGTGGGCGCGGCGGC GAGTCCGGCAGCCCGTCCACGTCGTTGGTGCTCGACCAGTTCGGCCGCAACCTGACCGCCGCCGCGATGGAGGGCAAGCT GGACCCGGTCATCGGCCGCGAGAAGGAAATCGAGCGGGTGATGCAGGTGCTGAGCCGGCGCACCAAGAACAACCCGGTGC TGATCGGCGAGCCCGGCGTCGGCAAGACGGCCGTCGTCGAGGGCCTGGCGCAGGCCATCGTGCACGGCCAGGTGCCCGAG ACGCTGAAGGACAAGCAGCTCTACACCCTGGACCTGGGTTCGCTGGTGGCGGGCTCGCGCTACCGCGGTGACTTCGAGGA GCGCCTGAAGAAGGTGCTCAAGGAGATCAACACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTGGTCG GTGCGGGTGCCGCCGAGGGCGCGATCGACGCGGCCAGCATCCTCAAGCCGAAGCTGGCCCGCGGCGAGCTGCAGACCATC GGCGCCACCACGCTCGACGAGTACCGCAAGTACATCGAGAAGGACGCCGCCCTGGAGCGTCGGTTCCAGCCGGTGCAGGT GGGTGAGCCGACGGTGGAGCACACCATCGAGATCCTCAAGGGGCTGCGCGACCGCTACGAGGCGCACCACCGGGTGTCCA TCACCGACTCGGCGATGGTCGCGGCCGCGACGCTGGCGGACCGCTACATCAACGACCGCTACCTGCCGGACAAGGCGATC GACCTGATCGACGAGGCGGGGGCGCGGATGCGGATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAA GATCGCCGAGGCGCGCCGGGAGAAGGAATCGGCGATAGACGCCCAGGACTTCGAGAAGGCCGCCAGCCTGCGCGACCGGG AGAAGCAGCTCGTCGCGCAGCGCGCCGAGCGCGAAAAGCAGTGGCGCTCCGGCGACCTCGACGTGGTCGCCGAGGTGGAC GACGAGCAGATCGCCGAGGTGCTGGGCAACTGGACCGGCATCCCGGTGTTCAAGCTGACCGAGGCCGAGACCACGCGCCT GCTGCGCATGGAGGACGAGCTGCACAAGCGGATCATCGGCCAGGAGGACGCCGTCAAGGCGGTCTCCAAGGCGATCCGCC GCACCCGCGCCGGGTTGAAGGACCCCAAGCGGCCGTCGGGCTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACC GAGCTGTCCAAGGCGCTGGCCAACTTCCTGTTCGGCGACGACGACGCGCTCATCCAGATCGACATGGGCGAGTTCCACGA CCGGTTCACCGCCTCGCGGCTGTTCGGCGCCCCGCCGGGATACGTCGGCTACGAGGAGGGCGGCCAGCTCACCGAGAAGG TGCGGCGCAAGCCATTCTCGGTGGTGCTGTTCGACGAGATCGAGAAGGCTCACCAGGAGATCTACAACAGCCTGTTGCAG GTCCTCGAGGACGGCCGGCTCACCGACGGCCAGGGCTGCACGGTCGACTTCAAGAACACCGTGCTGATCTTTACCTCGAA CCTCGGCACGTCCGACATCTCCAAGCCGGTCGGCCTGGGCTTCACCCAGGGTGGCGGTGAGAACAACTACGAGCGGATGA AGCAGAAGGTCAATGACGAGCTGAAGAAGCACTTCCGCCCGGAGTTCCTCAACCGCATCGACGACATCATCGTCTTCCAC CAGCTGACTCGCGACGAGATCATCCGGATGGTCGACCTGATGATCACCCGGGTCGCCGGCCAGCTCAAGAGCAAGGACAT GGACCTGGTGCTCACCGACAAGGCCAAGGCCCTGCTGGCCAAGCGCGGCTTCGACCCGGTGCTGGGTGCCCGCCCGCTGC GGCGCACCATCCAGCGCGAGATCGAGGACCAGCTCTCCGAGAAGATCCTCTTCGAGGAGGTCGGGCCCGGTCAGATCGTC ACGGTCGACGTCGACAACTGGGACGGCGAAAGCGCCGGCGAGGACGCGGTGTTCACCTTCACCGGTACCCGCAAGCCGCC GGCCGAGCCGGACCTGGCCAAGGCCGGGGCGCACAGCGCCGACCCGCAGTAG Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGG ESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGQVPE TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTI GATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRYLPDKAI DLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKQLVAQRAEREKQWRSGDLDVVAEVD DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT ELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ VLEDGRLTDGQGCTVDFKNTVLIFTSNLGTSDISKPVGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFH QLTRDEIIRMVDLMITRVAGQLKSKDMDLVLTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQIV TVDVDNWDGESAGEDAVFTFTGTRKPPAEPDLAKAGAHSADPQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 81 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | NP_959395.1 | ClpC | VFG0079 | Protein | 0.0 | 59 |
| clpC | NP_959395.1 | ClpC | VFG0080 | Protein | 3e-146 | 50 |
