Gene Information

Name : metB (MAP1026)
Accession : NP_959960.1
Strain : Mycobacterium avium K-10
Genome accession: NC_002944
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 1071753 - 1072919 bp
Length : 1167 bp
Strand : +
Note : catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine

DNA sequence :
ATGAGCGACGACGGCAACGCACACCCCGAGTTCAGCGGACTGGCCACCAAGGCGATTCACGCCGGCTACCGGCCGGACCC
GGCGACCGGAGCGGTCAACACGCCGATCTACGCCAGCAGCACCTTCGCCCAGGACGGGGTGGGCGCGCTGCGCGGCGGGT
ACGAGTACGCCCGCACCGGCAACCCGACCCGGGCCGCGCTGGAGGCCACGCTGGCCGCGGTGGAGGCCGGCAGCCACGGG
CGGGCCTTCGCCTCCGGCATGGCCGCCACCGACTGCGCGCTGCGGGCGGTGCTGCGGCCCGGCGACCATGTGGTGATCCC
GAATGACGCCTACGGCGGCACCTTTCGGCTGATCGACAAGGTGTTCACTCGCTGGAACGTCGAATACACGCCGGTGCCGT
TGCATCAGCTCGACGCCGTGGCCGCCGCGATCACGCCGCGCACCCGGCTGATCTGGGTGGAGACCCCGACCAACCCGTTG
CTGTCGATCGCCGACATCGCCGCGCTGGCCCAGCTGGGCCACCAGCACTCGGCAAAGGTGTTGGTGGACAACACCTTTGC
CTCGCCGGCGCTGCAGCAGCCGTTGACGCTGGGCGCCGACATCGTGCTGCATTCCACCACCAAGTACATCGGCGGGCACT
CCGACGTGGTGGGCGGTGCGCTGGTCACCAACGACGCCGAGCTGGACGACGCGTTCGGGTTCTTGCAGAACGGGGCGGGC
GCGGTGCCCGGCCCGTTCGACGCCTACCTGACCATGCGCGGGCTGAAGACCCTGGTGCTGCGGATGCAGCGGCACACCGA
AAACGCCTCTGCCGTAGCGCAATTCCTCGCCGGGCACCCCGCGGTGAGCGCGGTGCTCTATCCCGGCCTGCCCGGCCATC
CGGGCCACGACGTCGCCGCCCGGCAGATGTCGGGCTTCGGCGGCATGGTCTCGGTGCGGATGCGCGGCGGCCGGCAGGCC
GCCCGAAAGCTGTGCGCCAACACCCGGGTGTTCATCCTGGCCGAGTCGCTGGGCGGGGTCGAGTCGCTGATCGAGCACCC
CAGCGCGATGACGCACGCGTCGACGGCGGGGTCGCAACTGGAGGTGCCCGACGATCTGGTGCGGCTGTCGGTCGGCATCG
AGGACGTCGACGACCTGCTGGCCGACCTCGACCGGGCGCTCAGTTGA

Protein sequence :
MSDDGNAHPEFSGLATKAIHAGYRPDPATGAVNTPIYASSTFAQDGVGALRGGYEYARTGNPTRAALEATLAAVEAGSHG
RAFASGMAATDCALRAVLRPGDHVVIPNDAYGGTFRLIDKVFTRWNVEYTPVPLHQLDAVAAAITPRTRLIWVETPTNPL
LSIADIAALAQLGHQHSAKVLVDNTFASPALQQPLTLGADIVLHSTTKYIGGHSDVVGGALVTNDAELDDAFGFLQNGAG
AVPGPFDAYLTMRGLKTLVLRMQRHTENASAVAQFLAGHPAVSAVLYPGLPGHPGHDVAARQMSGFGGMVSVRMRGGRQA
ARKLCANTRVFILAESLGGVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVDDLLADLDRALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-69 47
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-70 47
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-49 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB NP_959960.1 cystathionine gamma-synthase BAC0207 Protein 2e-56 43