|
Name : serS (lpg0513) Accession : YP_094557.1 Strain : Legionella pneumophila Philadelphia 1 Genome accession: NC_002942 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 553352 - 554632 bp Length : 1281 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATAATCAATTACTTCGAGAGAATCCTCAATATGTAGCAACCCAATTGCTGAAACGAGGATTTCAATTTGATGC GGTCACTTTCAGTCAGTTGGAAGAAAAGCGTAAGGCTTTGCAAGTAAGTACGCAATCATTACAGAACGAACGAAATTTGC GTTCGAAAGCCATCGGTGAAGCTAAATCTCGAGGTGAAAACATAGGGCCTATGCGCGAAGAAGTGAATAAACTTGGCGCT ATACTGGAGCAGCAAAAGACTGAACTGGACGAGGTTCTTAAACAAATTGAGGTAATTAGCCTATCATTACCTAATATTCC TCATGAATCAGTACCTGTTGGTAAAGATGAATTGGATAATCAGGAAATCAGAAAATGGGGCGACGTACCTGCTTTTTCTT TCCCTGTAAAGTCACATGATGAATTGGGTGAAGCGCTAGGGCAAATGGATTTTGCGCTTGCAGCTAAAATTACGGGCAGC CGTTTTGTCGTCATGAAAGGGCATCTGGCCCGATTACATAGGGCTTTAATTCAATTTATGCTGGATATACATATTCAGCA ACATGGTTACCAGGAAATATATGTACCTTATATTGTTAATGCGGATAGCTTACTAGGGACTGGGCAGTTACCAAAGTTTG AGGCTGATTTATTTAAATTAACAGGAGATAATGGGTACTACTTGACGTCTACTTCAGAAATTCCAGTGACCAATACAGTA AGGGAAATGATATTGTCTGCTGAGCAATTACCTATTCGTTATGTTTGCCATTCCCCATGTTTTCGTAGTGAGGCGGGTTC TTATGGTAAAGACACAAAGGGAATGATTAGACAGCATCAATTTGAGAAAGTTGAACTGGTCTGGATTACCAAACCGGAAG ATTCTTATAATGCTTTAGAGCAACTTACTCAGCATGCTGAAATTATTTTACAGCGTTTGAACTTGCCTTACCGAGTGGTT GCTTTGTGTACCGGGGATATAGGTGCCGGTTCAGCCAAAACCTATGATCTTGAGGTTTGGTTGCCTAGCCAGAATACTTA TCGAGAAATATCCTCTTGTTCCAATATGGAGGCATTTCAGGCACGCCGAATGAAAGCGCGTTTCCGCAATCCGGATACTA ATGAGATTCAATTAGTCCACACTCTAAATGGATCAGGTTTAGCTGTTGGAAGAACTTTAGTTGCCATTATGGAGAATTAT CAAGATGAGCATGGAAACATTCATATACCGGATGCTTTGAAGCCTTATTTAGGTGGTATTGATATCATCTCTGTGAAATA G Protein sequence : MLDNQLLRENPQYVATQLLKRGFQFDAVTFSQLEEKRKALQVSTQSLQNERNLRSKAIGEAKSRGENIGPMREEVNKLGA ILEQQKTELDEVLKQIEVISLSLPNIPHESVPVGKDELDNQEIRKWGDVPAFSFPVKSHDELGEALGQMDFALAAKITGS RFVVMKGHLARLHRALIQFMLDIHIQQHGYQEIYVPYIVNADSLLGTGQLPKFEADLFKLTGDNGYYLTSTSEIPVTNTV REMILSAEQLPIRYVCHSPCFRSEAGSYGKDTKGMIRQHQFEKVELVWITKPEDSYNALEQLTQHAEIILQRLNLPYRVV ALCTGDIGAGSAKTYDLEVWLPSQNTYREISSCSNMEAFQARRMKARFRNPDTNEIQLVHTLNGSGLAVGRTLVAIMENY QDEHGNIHIPDALKPYLGGIDIISVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-100 | 51 |
