Gene Information

Name : yfeC (HD1025)
Accession : NP_873514.1
Strain : Haemophilus ducreyi 35000HP
Genome accession: NC_002940
Putative virulence/resistance : Virulence
Product : iron (chelated) transport system membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 815213 - 816070 bp
Length : 858 bp
Strand : -
Note : -

DNA sequence : 
ATGTTAGAACTATTACTTGAACCTTTCCAATACAACTATATGCAAAAAGCGATTTTTGTTAGTATGGCGGTTGGCGTGGT
TTGTGCTTTTCTGTCTGCTTTTTTAATGCTCAAAGGCTGGTCTTTAATCGGTGATGCACTTTCACATGCTGTAGTGCCAG
GTGTGGCGATTGCCTATGCATTGAAACTTCCTTATGTATTAGGTGCATTTGTCTCTGGTATTTTAGCCGCTTCATCTATT
CTTTGGGTAAAAAGTGTAACTAAAATTAAAGAAGATGCCATTATTGGCTTTGTTTTTACCACTTTTTTTGCACTTGGAAT
GTTTATTGTTTCCATCAATCCAACCTCTGTTGATGTAAATGCGATTGTGATGGGCAATATTCTAGGCATTGCTGATGGAG
ATCTATGGCAAGTCATCATCATTATCGGCGCTTCTTTACTTGGCCTACTCTTATTTTGGAAAGATTTGTTATTGACTTTT
TTTGATGAGCATCACGCAGCATCCGTCGGTCTTTCTACCTTCCGTTATAAAATCTTATTTTTTACTTTACTGAGTGCTTG
TGTCGTTGTTGCCTTACAAACTGTTGGTGCAATTTTGGTCATTACGATGGTAATTACGCCGGGTGCAACCGCTTATTTAT
TAACTGACCGCTTTCCTAGCTTGGTGATTATTGCAGCATTGATTGGCGGTTTAACAAGTATGTTAGGCGCTTACCTTAGC
TATTTCCTAAATGGCGCAACCGGAGGCTTAATTGTTTGCTTGCAAACCTTAGTCTTTTTATTTACTTTCTGCTTTTCTCC
TAAATATGGCTTGCTCTCACAGTATCGAAAACGTTTAGAGGTGACCCACAATGACTGA

Protein sequence : 
MLELLLEPFQYNYMQKAIFVSMAVGVVCAFLSAFLMLKGWSLIGDALSHAVVPGVAIAYALKLPYVLGAFVSGILAASSI
LWVKSVTKIKEDAIIGFVFTTFFALGMFIVSINPTSVDVNAIVMGNILGIADGDLWQVIIIIGASLLGLLLFWKDLLLTF
FDEHHAASVGLSTFRYKILFFTLLSACVVVALQTVGAILVITMVITPGATAYLLTDRFPSLVIIAALIGGLTSMLGAYLS
YFLNGATGGLIVCLQTLVFLFTFCFSPKYGLLSQYRKRLEVTHND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-64 60
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 9e-65 60
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 9e-65 60
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 8e-65 60
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-64 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC NP_873514.1 iron (chelated) transport system membrane protein BAC0441 Protein 6e-73 69
yfeC NP_873514.1 iron (chelated) transport system membrane protein BAC0351 Protein 5e-65 60
yfeC NP_873514.1 iron (chelated) transport system membrane protein BAC0442 Protein 2e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC NP_873514.1 iron (chelated) transport system membrane protein VFG0527 Protein 5e-65 60