|
Name : dnaB1 (HD0973) Accession : NP_873465.1 Strain : Haemophilus ducreyi 35000HP Genome accession: NC_002940 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 766159 - 767535 bp Length : 1377 bp Strand : - Note : - DNA sequence : ATGGCTAAAGATAAAGAGATCAAAATTAAAGTCTCGCCGACTTATTCTACCGAAGCGGAAGCAGCGGTACTCGGTAGCTT GATTTTAAAAAATGAGGCATTTGATGAAATCTCTACTCTGCTTTGTGCGGATGATTTTTTCAATCACCAACACAAAATTA TTTTTGAAGGAATTTCACGTCTGCTACAGCTTGGGAAACCCGTCGACCTTATTACGCTGGACCAATATCTGACTGATAAG AAATTAGTCGACGATATCGGTTTCGGTTACCTTGCTCAAATTACCAATGAAACACCTTCCGCCGCAAATATTGCGGCATA TGCAAAAGTTGTTGCACGTCATAGTAAACAGCGTCGTTTTCTAAAACTGGGACAGTTTATTGTTAGTGAAATGCAGTCAT CAAAAGACGAGGTTCAGCTTGAGGTCTTTGAAGAGAATGTTGATAAACAATATACCAATGTGACCGTCGAGCAAGAAAAA AATGATGTCGCCGATTTAGGTGAAGCCTTTGAACGTATCCTAACCCAAATGGAGGAATCCTCATCATCTGCCGATCCGGT CAGTGGAACACCAAGCGGTATTACGGAGCTGGATAATGTTACCACCGGTGGGCAACCGGGCGAGCTCATCATTATTGCAG CACGTCCGGCAATGGGGAAAACCACCTTTGCGCAACTTGTTGCACAAAGTACTCTAAATAAATATCCGGATGCGTCGATA CAATTCTATAGTCAAGAAATGCCGGCAGACCAACTCGTTCAACGCTTCATGTCTATGCGCTCCCGTATTAGCCTACAGTC CATTCGCCAAGCAACCGAGCTCACCGAATTAGCGTGGTCAAAAATCGCCGAAGCGATGGGCTATATCATGAATAATTGGA AAGATCGCTTACTCATTGATGATGAACCCTCTCTTCCCCCTTATCGTTTGCGCACTAAAGTTCGTAGGAATACCCGATTA TACGGTAAGCCAAAAGCCATCATTATTGACTACATTCAATTAATGCGCAGCACCGGCAAGTTTGAAAACCGTAATTTAGA ACTGGCAGAAATCTCCTCTGAGTTGAAAAAGTTGGCGAAAGAAACCGGTTGTCCGGTTTATGCCTTATCACAACTTAATC GTAGCCTCGAGCAACGTGCCAATAAACGTCCGGTCAATTCCGATTTACGAGATTCCGGTTCGTTAGAACAAGACGCCGAT GTGATTTATCACCTCTACCGCGATGAAGTTTATAACCCACAGTCCGAACAACGCGGTTGTGTTGAAATCATTATCGGTAA ACAACGCAACGGTCCGTTAGCGACGGTTACCGCAAAGTTTTTAGGTCAATACTCATTATTTGAGAACATGGATAATAAGG ATAGCCGTTATGAGTAA Protein sequence : MAKDKEIKIKVSPTYSTEAEAAVLGSLILKNEAFDEISTLLCADDFFNHQHKIIFEGISRLLQLGKPVDLITLDQYLTDK KLVDDIGFGYLAQITNETPSAANIAAYAKVVARHSKQRRFLKLGQFIVSEMQSSKDEVQLEVFEENVDKQYTNVTVEQEK NDVADLGEAFERILTQMEESSSSADPVSGTPSGITELDNVTTGGQPGELIIIAARPAMGKTTFAQLVAQSTLNKYPDASI QFYSQEMPADQLVQRFMSMRSRISLQSIRQATELTELAWSKIAEAMGYIMNNWKDRLLIDDEPSLPPYRLRTKVRRNTRL YGKPKAIIIDYIQLMRSTGKFENRNLELAEISSELKKLAKETGCPVYALSQLNRSLEQRANKRPVNSDLRDSGSLEQDAD VIYHLYRDEVYNPQSEQRGCVEIIIGKQRNGPLATVTAKFLGQYSLFENMDNKDSRYE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 3e-119 | 57 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-81 | 46 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-81 | 46 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 6e-87 | 46 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-87 | 46 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 4e-76 | 45 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-84 | 45 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-77 | 42 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 3e-67 | 41 |
