Gene Information

Name : HD0945 (HD0945)
Accession : NP_873438.1
Strain : Haemophilus ducreyi 35000HP
Genome accession: NC_002940
Putative virulence/resistance : Virulence
Product : DNA repair protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 751351 - 751824 bp
Length : 474 bp
Strand : -
Note : -

DNA sequence : 
ATGCAATTATCAACTCAACATCAAGACATGTTAAATCAAGCAAAAGCACTTTATGAAAACGTGCTACGCGAAACCGGTAT
TCGCTCTTATGCGTCAAACCCGTCATTCGGTGATGAAAAAGAAGCATCCGAGTATTGTCAAATGCAACTCGGTTTTGAAG
AGCGTGAAGTCTTTGGTGTGTTATTTTGGGACACGCAAAACCGTCTAATCCGCTTTGAAAAACTATTTTTCGGCACGATT
AATCAAGCGTCAATACACCCTAGAGAAATCGTCAAAAAAGCACTTGAGCTTAATTCGTCTGCCGTCATTTTGACTCATAA
CCATCCTTCAGGTCAGGTTACGCCAAGTCAAAGTGATAAACAAACCACGGCTAAAATTAAACAAGCCTGTCAGTTAATTG
ATGTTAACGTCCTCGACCACATTATTGTTTCGGCAACCGATACTTACAGTTTCTGTATGCATCAATTGATGTAG

Protein sequence : 
MQLSTQHQDMLNQAKALYENVLRETGIRSYASNPSFGDEKEASEYCQMQLGFEEREVFGVLFWDTQNRLIRFEKLFFGTI
NQASIHPREIVKKALELNSSAVILTHNHPSGQVTPSQSDKQTTAKIKQACQLIDVNVLDHIIVSATDTYSFCMHQLM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 6e-23 49
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 3e-23 45
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 3e-23 45
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 2e-23 45
unnamed CAD42098.1 hypothetical protein Not tested PAI II 536 Protein 5e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HD0945 NP_873438.1 DNA repair protein VFG1119 Protein 9e-24 45
HD0945 NP_873438.1 DNA repair protein VFG1617 Protein 2e-23 41