Gene Information

Name : HD0936 (HD0936)
Accession : NP_873429.1
Strain : Haemophilus ducreyi 35000HP
Genome accession: NC_002940
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 746420 - 747280 bp
Length : 861 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAGATGATTTTATTCGTAGGAGCCTCATTACTCCTCTCCAATGTAGCCTCGGCAGAAATCCTATTGAAATGGGA
TCGCAAGCCATTACCCATTGAACTACAAGTCAAAGAAGAGCGAATCGTCTTCGCGGATAAAAATGTGAAAGTGGGCTACC
CGGCGCAATTAGAGGGCAAATTACGTATGCAATCTAGCGGCGGTGCTGTTTATTTTACCGCATTAGCCGAATTCCCGAAA
TCCCGCTTGCAATTGGTTGACCTGGCTACCGGTGAGCTAATTTTACTTGATGTAGAAGCAAAACCTCATATACCGAATGC
AAATGAACCGATACGTCTTGTTTATACCGATAAAGTCGAAAAACAATCTACCGTCTTTAATCAAGATAGCGGTGAGGAGG
CTGATTTAAAAAATGTTAAGCCGCAATTACCGGTACCGGCGGCACTAACCCGCTACGCAGCACAAATGTTCTATGCACCG
CTACGTACGGTTGAACCGTTAGAAGGCGTGCGACAAGTCGCTCACCGCTTACCGAATAAAATTACCACGTTATTGCCGGC
TTATCCGATTCAAGCCACGCCACTTCTTAGTTGGCAATTAGAAAACTTTGTTGTCACGGCAATTCGCCTGCAAAACCGGG
GGAGCAGTCATATCGAACTTGACCCAAGAGAATTACAAGGGCGATTCTATGCCGCTACGTTTCAACACGGTTGGTTGGGA
GGGCATGGTTCACCGGAAGATACCACAACACTTTATTTAGTAACGGAAGGCTATGCCAACCAAGCGCTGATCCCGGAAAC
TCATCAATATAAAACAAGAAAACTGAAAAAAGTGACAACCACGACAACCGTCATTAAATAA

Protein sequence :
MKKMILFVGASLLLSNVASAEILLKWDRKPLPIELQVKEERIVFADKNVKVGYPAQLEGKLRMQSSGGAVYFTALAEFPK
SRLQLVDLATGELILLDVEAKPHIPNANEPIRLVYTDKVEKQSTVFNQDSGEEADLKNVKPQLPVPAALTRYAAQMFYAP
LRTVEPLEGVRQVAHRLPNKITTLLPAYPIQATPLLSWQLENFVVTAIRLQNRGSSHIELDPRELQGRFYAATFQHGWLG
GHGSPEDTTTLYLVTEGYANQALIPETHQYKTRKLKKVTTTTTVIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 6e-86 64
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 5e-57 49
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 3e-55 49
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 1e-56 48
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 6e-53 48
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 6e-53 48
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-53 48
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 6e-53 47
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 3e-53 47
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 9e-53 46
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 5e-50 46
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 5e-50 46
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 5e-40 45