Gene Information

Name : tnpR (HD0908)
Accession : NP_873403.1
Strain : Haemophilus ducreyi 35000HP
Genome accession: NC_002940
Putative virulence/resistance : Resistance
Product : transposon gamma-delta resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 727649 - 728233 bp
Length : 585 bp
Strand : +
Note : -

DNA sequence : 
ATGAGACTATTTGGTTATGCCCGGGTATCAACAGCTCAACAAGATTTAACAATTCAGGTGCAAACTTTAAAAGATGCCGG
TGTTGAAGAGCATCGAATTTTTACAGATAAACGTTCAGGTAAAGATTTAAAACGTGACGGGCTTGAATTACTTAAATTAA
AAGTTGAGCCGGGTGACATGATTTTAGTCAAAAATCTTGATCGATTAGGGCGCGATGCGGCTGATATGTTGAACCTGGTT
AAATATTTTAATCAGTTGAATGTTTACATCAAATTTCTTGATAACGGTTTTTCAAGTGAAGGCACTACCGGACTACTTCT
TATTACAATTCTAGCCGGCGTAGCGCAATCTGAAAGAGCAAGAATTTTAGAAAGAACAAACGAAGGACGTTTGGCTGCTA
TGGCTAGTGGTGTGAAATTTGGTCGTAAGAGAAAAGTGCCACGAGATAAGATTATCAAATTATTTGAAGAAGGGAAAAAG
CCAATGGAAATCTCAAGGTTATTAAATGTAAGTAAGTCAATGGTTTATTTGGTTTTGAAAGAGAGCTCTAATAAGGCAAA
TTGGGAAAAAGAAAACCGCGTGTAG

Protein sequence : 
MRLFGYARVSTAQQDLTIQVQTLKDAGVEEHRIFTDKRSGKDLKRDGLELLKLKVEPGDMILVKNLDRLGRDAADMLNLV
KYFNQLNVYIKFLDNGFSSEGTTGLLLITILAGVAQSERARILERTNEGRLAAMASGVKFGRKRKVPRDKIIKLFEEGKK
PMEISRLLNVSKSMVYLVLKESSNKANWEKENRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACK44544.1 Tn2 resolvase Not tested SGI1 Protein 1e-45 56
tnpR AGK07036.1 Tn2 resolvase Not tested SGI1 Protein 1e-45 56
tnpR AGK07094.1 Tn2 resolvase Not tested SGI1 Protein 1e-45 56
tnpR ACF06167.1 resolvase Not tested Tn5036-like Protein 9e-45 56
tpnR ADZ05795.1 resolvase Not tested AbaR17 Protein 8e-38 53
ABTW07_3873 YP_005797121.1 transposon Tn3 resolvase Not tested AbaR4e Protein 1e-38 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpR NP_873403.1 transposon gamma-delta resolvase GU371926.1.gene95.p0 Protein 6e-45 56