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Name : potB (HD0573) Accession : NP_873119.1 Strain : Haemophilus ducreyi 35000HP Genome accession: NC_002940 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter membrane protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 442925 - 443791 bp Length : 867 bp Strand : + Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component DNA sequence : ATGAAGATTGCTAATAACAAATTTCAAAATGGTACAGTGGCTGTTATTTTTGGGTGGTTGTTGCTTTTTGTACTGGTTCC AAATTTACTGGTGTTATTGATCAGTTTTTTAACTGAAAATCGTCAAAGTGCTTATTTTGTTGATTTTAGTTTTAATCTTG ATTCGTATGCGGCCTTGTTTAATGATACTTATGCAACAGTATTATGGAACTCGTTAAAAATGTCAGCAATAGCGACTTTT TTCTGTTTGCTGATTGGTTATCCTTTTGCTTTTATTATTGCCAAAATGCCAGCAAAAATACGACCGCTATTACTTTTTCT AGTGGTATTGCCTTTTGGGACTAATTCATTGATTCGTATTTATGGTATTAAAATTTTCTTAGGCGTAAAAGGTGTATTGA ATGAAGCATTACTCGCAGTAGGTTTGATTGATCAACCTTTACGGTTACTCAATTCAGAATTGGCCATTATTATTGGTTTG GTTTATATTCTATTGCCCTTTATGATTTTACCGCTGTATTCTTCAATTGAGAAAATTGATAATCGTTTATTAGAAGCGGC AAAAGATTTAGGTGCAAATGCATTGCAACGCTTTATTCGTATCACTATTCCATTAACGATGCCGGGTATTGTGGCCGGTT GCTTATTAGTATTATTGCCTGCGATGGGAATGTTCTATGTTGCAGATCTATTAGGCGGTGGTAAAACGCCATTAATTGGT AATATTATCAAGAGTCTATTCTTGAATACTAACCAGTTACCATTAGGATCGGCAGTCAGTATTGCATTAACCTTGCTCAT GGCATTGATGTTGTATGTATATTATCGTGCTAACAAATTTTTAAATAAAAAGGTGGAGCTTGAATAA Protein sequence : MKIANNKFQNGTVAVIFGWLLLFVLVPNLLVLLISFLTENRQSAYFVDFSFNLDSYAALFNDTYATVLWNSLKMSAIATF FCLLIGYPFAFIIAKMPAKIRPLLLFLVVLPFGTNSLIRIYGIKIFLGVKGVLNEALLAVGLIDQPLRLLNSELAIIIGL VYILLPFMILPLYSSIEKIDNRLLEAAKDLGANALQRFIRITIPLTMPGIVAGCLLVLLPAMGMFYVADLLGGGKTPLIG NIIKSLFLNTNQLPLGSAVSIALTLLMALMLYVYYRANKFLNKKVELE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 3e-65 | 62 |
