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Name : mutS (HD2024) Accession : NP_874342.1 Strain : Haemophilus ducreyi 35000HP Genome accession: NC_002940 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1683966 - 1686566 bp Length : 2601 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGAATAAAGATGTTTCACAACATACTCCGATGATGCAGCAATATCTGCAATTAAAAGCGCAACATCCCGATATTTTATT ATTTTATCGAATGGGGGATTTTTACGAACTTTTTTATGAAGATGCTAAAAAAGCTGCGGTGTTATTAGATATTTCATTAA CCAAACGGGGGGCCTCTGCTGGTGAGCCAATCCCAATGGCAGGTGTGCCTTATCATGCGGTGGAAGGCTATTTAGCTAAA CTAGTGGCACTTGGTGAGTCGGTGGCAATTTGTGAGCAAATAGGCGAAGTGGGGGCTTCAAAAGGACCGGTCGAGCGTAA AGTAGTGCGGATTGTAACGCCGGGGACTGTCAGTGATGAAGCCTTATTACCTGAACGACAAGATAATTTGGTGGCGGCTA TTTGCGAGCAAAAAGGTGTTTTTGCGATTGCTACATTAGATATGACTTCCGGGCGATTTTTGATTAGTGAATTAGCCAAT AAAACGGCTTTAATGGCAGAATTACAGCGTGTAATGCCGGCAGAAATACTATATCCAGAAGACTTTGCTTATATACCCAT GTTAAATAATTATAAGGGGTTACGGCGGCGTCCTTGTTGGGAATTTGAGTTGGTTACTGCAATTCAATTATTAAATAGAC AATTTGGCACCCAATGTTTAGATGGTTTTGGTGTTCAACAAGCAAAAGTTGCGTTGTGTGCTGCCGGCTGTGTTTTACAT TATGCACAAGAAACACAACGTACTGCTTTACCGCATATTAATAGCATTCATCTCTCGCAAGATAGTGAAATGGTGTTATT AGATGCCGCCACCCGTAGAAATTTAGAGCTAACTCAAAATTTAGCGGGCGGTACAGAAGCAACGCTTGCTTCGGTATTAG ATAAATGCGTTACGCCAATGGGCAGCCGTTTATTAAAGCGGTGGATTCATCAACCGATTAGGCAATTAGATATCCTAAAA AGCCGACAAGATATGATCGCTACTTTGCAACAATACGAGCAAATTGAACCGCTTCAGCCTTTGTTGCGTAATGTGGGCGA TATGGAACGTATTTTGGCGCGCATTGCTTTGCGTTCTGCACGTCCTAGAGATTTAACGCGGTTACGAACAGCATTGGCAC AACTGCCTTTAATTGCAAAGTGTACGCAAAATTTGGGTGCTTGTTTGGCTGTATTATTGAGCAAAAATGCTGATTTTAGT GAGTTATATACCTTGTTAGAACAGGCTATTATTGAAACACCGCCACAGTTAATACGAGATGGTGGGGTAATCGCGGAAGG CTATCACGCAGAATTAGATGAATGGCGTACATTGTCTGCGGGGGCGACACAATATTTAGACAATTTAGAAATTCGTGAGC GTGAAAGTACCGGTATTGATACGTTAAAGATCGGTTTTAATGCTGTACAAGGCTATTACATTCAAATTAGCCAAGCGCAA GCACATAAAGCACCTATACATTATGTTCGCCGCCAAACACTGAAAAATGCTGAGCGGTATATTATCCCTGAGTTAAAAAC CTATGAGGATAAGGTGTTAAAGGCGAAAGGTGCAGCACTTGCATTAGAAAAGCAACTTTATGAACAGTTGTTTGATTTAA TTATGCCGCATTTGGGCGCGCTACAGCAAACGGCAATGGCACTATCTGAATTAGATGTGTTAGTGAATTTGGCAGAGCGG GCAGAAAGTTTGCATTATGTTCGGCCCTCTTTTAGCTTGCAACGTGGTATTAATATTAAAGCTGGGCGGCATCCGGTGGT TGAACACGTGATGGTTGAGCCATTTATTGCTAATACGGTTTTTTTGAATTCACAACGACATTTACTGATTGTTACCGGGC CCAATATGGGCGGTAAAAGCACGTATATGCGTCAAACGGCTTTGATTTGTTTAATGGCGTATATCGGCAGTTTTGTGCCG GCTGAAAGTGCTGAAATTGGTGTTATCGATCGTATTTTTACGCGCATTGGCGCTAGCGATGATTTAGCCTCTGGTCGTTC TACTTTTATGGTTGAGATGACTGAAATGGCAAATATTCTGCATCAAGCTACCGCGCAAAGCGTGGTTCTGATTGATGAAA TTGGGCGAGGCACTTCCACTTACGATGGGTTAGCCTTGGCGTGTGCGTGTGCTGAATGGTTGGCGAACAAAACACAATCA TTGACATTATTTGCCACTCACTATTTTGAATTAACCAGTTTACCTAGTCAGTTAAAAGGCGTGGCAAATGTTCATTTAGA TGCGTGTGAATATAATGATACGATCGCCTTTATGCATAGTGTACAAGAAGGGGCGGCAAGCAAGAGTTATGGCTTGGCGG TAGCCGCATTAGCGGGGGTGCCAAAACAAGTGATAGCCTTAGCAAAACAACGTTTAGTGCATTTAGAAGAATTTTCACAA CAAACTAAAATGGCTCAACAGCATCCGCAAGCGGATTTATTATTTACGGTGGAAATGCCAGAAGAGGAAAAAATGGCACC GCTTGCAAAGGCTGAAAGTGCGGTAGAGCTTGCCTTAAGAGCAATAACACCTGATGAATTAACACCTCGTCAGGCATTAG ATGAACTATATCGCTTAAAAAAATTATTATCGTCTAGTTGA Protein sequence : MNKDVSQHTPMMQQYLQLKAQHPDILLFYRMGDFYELFYEDAKKAAVLLDISLTKRGASAGEPIPMAGVPYHAVEGYLAK LVALGESVAICEQIGEVGASKGPVERKVVRIVTPGTVSDEALLPERQDNLVAAICEQKGVFAIATLDMTSGRFLISELAN KTALMAELQRVMPAEILYPEDFAYIPMLNNYKGLRRRPCWEFELVTAIQLLNRQFGTQCLDGFGVQQAKVALCAAGCVLH YAQETQRTALPHINSIHLSQDSEMVLLDAATRRNLELTQNLAGGTEATLASVLDKCVTPMGSRLLKRWIHQPIRQLDILK SRQDMIATLQQYEQIEPLQPLLRNVGDMERILARIALRSARPRDLTRLRTALAQLPLIAKCTQNLGACLAVLLSKNADFS ELYTLLEQAIIETPPQLIRDGGVIAEGYHAELDEWRTLSAGATQYLDNLEIRERESTGIDTLKIGFNAVQGYYIQISQAQ AHKAPIHYVRRQTLKNAERYIIPELKTYEDKVLKAKGAALALEKQLYEQLFDLIMPHLGALQQTAMALSELDVLVNLAER AESLHYVRPSFSLQRGINIKAGRHPVVEHVMVEPFIANTVFLNSQRHLLIVTGPNMGGKSTYMRQTALICLMAYIGSFVP AESAEIGVIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSVVLIDEIGRGTSTYDGLALACACAEWLANKTQS LTLFATHYFELTSLPSQLKGVANVHLDACEYNDTIAFMHSVQEGAASKSYGLAVAALAGVPKQVIALAKQRLVHLEEFSQ QTKMAQQHPQADLLFTVEMPEEEKMAPLAKAESAVELALRAITPDELTPRQALDELYRLKKLLSSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | NP_874342.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 68 |
