|
Name : recG (HD1921) Accession : NP_874255.1 Strain : Haemophilus ducreyi 35000HP Genome accession: NC_002940 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 1615543 - 1617636 bp Length : 2094 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGGAAAAACAACTTTTAAACGATATACCTCTCATTAGCCTAGCGGGAGTAGGAACTGCCATCGCTGAAAAATTACATCG CTTAGCGATTTATAATGTGCAAGATTTGCTATTTCACTTGCCGATTCGCTATGAAGATCGCACTCGAATCACCGCTATTG CTGATGTTCGGCCTGCGCATTTTGTTACGATTGAAGGGCAAGTTCAACTGACAGAAGTTGAGTACAGTAGACGAGCGATT TTGGCGGTGGTGCTTTCTGATGGTACAAGTAAAATTATGTTGAAGTTCTTTAATTTTAATGCCGGTATGAAAAATGGCTT TGCAGTTGGTGTACGAGTAAAAGCTTTTGGTGAAATTAAACGAGGCCGCTTTATGGCTGAAATTCACCATCCTGAATATC AAATTATTCGACATAATCAACCACTAACATTAGCCGAAAGTTTAACACCAATTTATACCACCACAGAAGGCTTAAAACAA AATTCACTACGTAAACTGACCGAACAAGCATTAGCGCTATTAAACAAGATACAAATTGCTGAATTACTCCCCGCACAATA CAATCCATATCAATACAACTTAACTGAAGCCTTACAATTATTACATTGCCCACCGCCCAACATTTCTGCCGAAACCTTAG CGCAAGGCGAACATCCGGCACAAAAGCGGCTGATTTTTGAAGAATTATTGGCACATAATTTAGCTATGCAACAATTACGC CTTGGGGTCAAACAGCTATACGCCACGCCATTACATTACCAAACCGAGTTAAAAACGCGCTTTTTAGCCAATTTAGCATT CCAACCTACACCGGCACAAACGCGGGTCACCGCCGAGATCGAAAACGATTTAGCACAAGCGGTCCCTATGATGCGATTAG TGCAAGGCGATGTAGGTTCAGGTAAAACATTAGTGGCTGCCTTAGCCGCATTATTAGCGATTGATAACGGCAAACAGGTG GCATTAATGGCGCCAACTGAAATTTTGGCAGAGCAGCATGCAACTAATTTTACACAGTGGCTCAAACCATTTGACATTAA CGTTGGCTGGCTAGCGGGCAAAATAAAAGGCAAAGCAAGAACCGCACAATTAACCGCAATTGAGCAAGGCGAAGTGCAGA TGATTATTGGCACGCATGCGTTATTTCAAGAAAGTGTCGCATTTCACGATTTGGCATTGGTGATCATTGATGAACAGCAC CGCTTTGGCGTACATCAACGTTTAACATTACGGGCAAAAGGTGCTAAAACAATCAATGGACAAGAAATTTATCCCCATCA ATTAATTATGACCGCTACGCCTATTCCACGCACGTTAGCAATGACCGTTTATGCTGATTTAGATACCTCACTTATTGATC AATTACCGCCAGGTAGAACGCCGATCAAAACGATTGTTATTGCTGAAGAACGTCGCGCAGAAGTGGTACAGAGGGTGTAT CACGCCTGTAAGAATGAAGGTCGCCAAGCTTATTGGGTATGCACATTAATTGATGAATCCGAGGTGCTAGAAGCACAAGC CGCAGCAGCAATTGCTGAAGATCTACAAGGTGCGCTACCCGATTTACGTATTGGTTTAGTACATGGACGAATGAAACCGC AAGAAAAACAAACCATTATGGCCGCATTTAAAGCGGCAACATTAGATTTATTGGTTGCAACTACCGTGATTGAAGTGGGC GTTGATGTGCCAAATGCTAGCCTTATGATTATTGAAAATTCCGAACGTTTAGGGCTAGCACAATTACATCAGTTACGTGG GCGTGTAGGTCGTGGAGCGACTGCCTCTCATTGTGTGTTAATGTATAAACCACCGCTAGGTAAAATTTCTAGCAAACGTT TACAAGTTATGCGTGATAGCCAAGATGGTTTTTATATCGCCGAGAAAGATTTAGAGATTCGAGGTACGGGTGAAATTCTT GGCACTAAACAAACGGGTATGGCTGAATTTAAAGTTGCTAATCTAATGCGCGATCGTAAACTGATTCCTTTAGTGCAACA CTCTGCCAAACAAATTATTAGTGAACATCCAGCGCTTGCTGAAGCCTTGATCGCACGCTGGCTGAATCAAAAAGCCGATT ACTGCAATGCTTAA Protein sequence : MEKQLLNDIPLISLAGVGTAIAEKLHRLAIYNVQDLLFHLPIRYEDRTRITAIADVRPAHFVTIEGQVQLTEVEYSRRAI LAVVLSDGTSKIMLKFFNFNAGMKNGFAVGVRVKAFGEIKRGRFMAEIHHPEYQIIRHNQPLTLAESLTPIYTTTEGLKQ NSLRKLTEQALALLNKIQIAELLPAQYNPYQYNLTEALQLLHCPPPNISAETLAQGEHPAQKRLIFEELLAHNLAMQQLR LGVKQLYATPLHYQTELKTRFLANLAFQPTPAQTRVTAEIENDLAQAVPMMRLVQGDVGSGKTLVAALAALLAIDNGKQV ALMAPTEILAEQHATNFTQWLKPFDINVGWLAGKIKGKARTAQLTAIEQGEVQMIIGTHALFQESVAFHDLALVIIDEQH RFGVHQRLTLRAKGAKTINGQEIYPHQLIMTATPIPRTLAMTVYADLDTSLIDQLPPGRTPIKTIVIAEERRAEVVQRVY HACKNEGRQAYWVCTLIDESEVLEAQAAAAIAEDLQGALPDLRIGLVHGRMKPQEKQTIMAAFKAATLDLLVATTVIEVG VDVPNASLMIIENSERLGLAQLHQLRGRVGRGATASHCVLMYKPPLGKISSKRLQVMRDSQDGFYIAEKDLEIRGTGEIL GTKQTGMAEFKVANLMRDRKLIPLVQHSAKQIISEHPALAEALIARWLNQKADYCNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 6e-102 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| recG | NP_874255.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 0.0 | 58 |
