Gene Information

Name : yfeB (HD1817)
Accession : NP_874178.1
Strain : Haemophilus ducreyi 35000HP
Genome accession: NC_002940
Putative virulence/resistance : Virulence
Product : iron (chelated) transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1522831 - 1523589 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
ATGAACAATATAACACAAGCTACAGCATCCATTTCTGTTGATAAATTAACCGTCCGTTACAACAACGGACATTTAGCCTT
AGAAAATGTCTCTTTCCAGCTTCAGCATGGCACTGTTTGTGCATTAATTGGCGTAAATGGCGGTGGTAAATCAACGCTTT
TTAAAAGCTTGATGGGATTAGTTAAGCCGTTAACCGGTCAAGTATTACTGAACCAAATGCCCATTCAAAAAGCACTTAAA
CAAAACCTTGTTTCTTATGTGCCTCAAAGTGAAGAAGTGGATTGGCAATTCCCCGTATCTGTTTATGACGTTGTGATGAT
GGGCCGTTATGGTTATATGAATTTTTTACGCAATCCATCTGCACTAGATAAACAGAAAGTTGAACAAGCTATGCAACGTG
TTGATATTAGCCATTTGCAACATCGGCAAATTGGTGAACTCTCAGGCGGACAGAAAAAGCGGGTATTTCTGGCCCGAGCC
TTAGCGCAAGAAAGCCAGATTATTTTATTAGATGAACCATTTACTGGTGTTGATGTCAAAACAGAAAATGCCATTGTAGC
TTTACTTCAACAATTGCGGAGTGAAGGGCATTTAGTATTGGTTTCTACTCATAATCTCAACAGTGTATCTAGTTTTTGCG
ATCAAGTATTAATGATTAATCGTACATTGCTTGCTTCGGGCCCAACGGCAACAACATTTAATCATCAAAATTTAGAGAAA
GTATTTGGTGGCATTGTACATTATTTGCAAGCTAGTTAA

Protein sequence : 
MNNITQATASISVDKLTVRYNNGHLALENVSFQLQHGTVCALIGVNGGGKSTLFKSLMGLVKPLTGQVLLNQMPIQKALK
QNLVSYVPQSEEVDWQFPVSVYDVVMMGRYGYMNFLRNPSALDKQKVEQAMQRVDISHLQHRQIGELSGGQKKRVFLARA
LAQESQIILLDEPFTGVDVKTENAIVALLQQLRSEGHLVLVSTHNLNSVSSFCDQVLMINRTLLASGPTATTFNHQNLEK
VFGGIVHYLQAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-70 61
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-70 61
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 9e-72 61
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-72 61
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 7e-72 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeB NP_874178.1 iron (chelated) transporter ATP-binding protein BAC0440 Protein 8e-79 65
yfeB NP_874178.1 iron (chelated) transporter ATP-binding protein BAC0350 Protein 4e-72 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeB NP_874178.1 iron (chelated) transporter ATP-binding protein VFG0526 Protein 4e-72 61