Gene Information

Name : yfeA (HD1816)
Accession : NP_874177.1
Strain : Haemophilus ducreyi 35000HP
Genome accession: NC_002940
Putative virulence/resistance : Virulence
Product : iron ABC transporter substrate-binding proten
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1521929 - 1522834 bp
Length : 906 bp
Strand : +
Note : -

DNA sequence : 
ATGAATCTTTCCTTTCTAAAAAAGACCCTAATTATTGCATGCGCAATGGGAACAACTGTTGCAATAGCAGCCCCCTTCAA
GGTCGTCACCACATTTACAGTGATTCAAGATATTGCCCAAAATGTAGCCGGTGATAAAGCAATTGTAGAATCTATTACTA
AACCAGGTGCTGAAATCCACGACTATCAACCTACGCCCAAAGATATTGTCAAAGCACAAAAAGCGGATTTAATTCTACAA
AATGGCATGAACCTTGAACGTTGGTTTGAACGATTCTTTGAAAACGTTAAAAATACACCGGCTGTCGTCGTAACTGAAGG
CATTCAGCCGATTGCTATTTTAGAAGGTGAATATAAAAACTTGCCTAATCCGCATGCATGGATGTCTTCCGCCAATGCGT
TGCAATATATTGAGAATATTCGAGCTGCCTTGGTCAAATACGATCCCGAAAATGCGGTTAGCTATAATCAAAATGCAAAA
GCCTATGCCGAAAAAATAAAAGCAATCTCTGAGCCACTTCGCCAACGCTTATCCGTTATTCCTGAAAAACAACGTTGGTT
AGTAACCAGTGAAGGGGCATTTAGCTACCTTGCACAAGATTATGGCTTACAAGAATTATATTTATGGCCCATTAATGCTG
AAGAACAAGGTTCACCACAACAAGTGAGAAAAGTAATTGATGGAGTTAAAGCTAATCATATTCCAGTCGTATTTAGCGAG
AGCACTGTATCAGATAAGCCTGCAAAACAAGTTGCTAAAGAAACAGGCGCGTTATATGGCGGGGTATTATACGTTGATTC
ACTCTCCACCAAAGAAGGACCTGTACCCACTTATTTAGATTTATTAAAAGTGACAATTTCTACTATAGTAGATGGTTTTG
AAGCGAGCAAAAAAGAGCCTAAATGA

Protein sequence : 
MNLSFLKKTLIIACAMGTTVAIAAPFKVVTTFTVIQDIAQNVAGDKAIVESITKPGAEIHDYQPTPKDIVKAQKADLILQ
NGMNLERWFERFFENVKNTPAVVVTEGIQPIAILEGEYKNLPNPHAWMSSANALQYIENIRAALVKYDPENAVSYNQNAK
AYAEKIKAISEPLRQRLSVIPEKQRWLVTSEGAFSYLAQDYGLQELYLWPINAEEQGSPQQVRKVIDGVKANHIPVVFSE
STVSDKPAKQVAKETGALYGGVLYVDSLSTKEGPVPTYLDLLKVTISTIVDGFEASKKEPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-92 67
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-92 64
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-92 64
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-92 64
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-92 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA NP_874177.1 iron ABC transporter substrate-binding proten BAC0439 Protein 1e-96 70
yfeA NP_874177.1 iron ABC transporter substrate-binding proten BAC0349 Protein 6e-93 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA NP_874177.1 iron ABC transporter substrate-binding proten VFG0525 Protein 6e-93 64