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Name : ribD (HD1161) Accession : NP_873627.1 Strain : Haemophilus ducreyi 35000HP Genome accession: NC_002940 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG1985 EC number : - Position : 943332 - 944438 bp Length : 1107 bp Strand : + Note : riboflavin-specific deaminase DNA sequence : ATGACAGATGTTGACTATATGGCTCGTGCGATAGCACTGGCAGAACAAGCACGTGGTTGGACTAATCCTAATCCATTAGT GGGCTGTGTGATCGTTAAAAATGATCAAATCATCGCAGAAGGCTATCACCAAAAGGTAGGCGAATGGCACGCAGAGCGTA ATGCTATTTTAAATTGTCAGCAAGATCTCACAGGGGCCACTGCTTACGTTACACTTGAGCCTTGTTGCCATCATGGGCGC ACACCGCCTTGTACTGATTTGCTTATTGAACGAGGAATTAACAAAGTGTTTGTGGGCTCTCGTGATCCTAATCCACTGGT TACGGGGAAGGGGATTAAACAATTACAAGCAGCGGGCATAGAAGTGATCACTGATTTTATGCGAGAAGCTTGCGATCAGC TCAACCCCATTTTTTTTCATTATATGCAAACTACATCTCCTTATGTGTTGCTTAAATATGCAATGACAGCAGATGGTAAA ATTGCTACCGCTACAGGTGAATCCAAATGGATTAGCGGTGAATTAGCACGCCAAAATGTGCAAATCACACGTCATCAATA TAGCGCCATTATGGTTGGAGTGGGCACCGTATTAGCGGATAATCCGATGTTAAATAGTCGAATGCCGAATGCTAAACAAC CAATACGCGTTGTGTGCGATAGCCACTTACGAACGCCTCTAGCGTGTCAATTAGTTCAAACAGCGCGCCAATATCCAACC ATTATTGCAACCGCTTCAACTGATAGTACAAAAATAGCGCAATTGAAAGCCTTTGGCGTGCAAATTATCCAATGTAAGGT AGCCAACAAACAAGTTGATTTAGTTGATTTATTAGCCAAATTAGGTGCAATGCAAATTGACAGTGTCTTGCTTGAAGGGG GATCAACACTGAATTTTAGTGCATTGAAAGCTGGCGTTGTTAACAGAATTCATTGTTATATTGCACCTAAATTATTAGGC GGAAGCACTGCCAAAAGTCCTATCGGTGGTGCAGGTATTTTGCAACTAGCGGAAGCGGTTAATTTAACGCTTAAATCCAC ACAATACATAGGCGACGATATCTTGTTAGATTATGACGTTTCATCATCGCAAAAATTAGCAAGCTGA Protein sequence : MTDVDYMARAIALAEQARGWTNPNPLVGCVIVKNDQIIAEGYHQKVGEWHAERNAILNCQQDLTGATAYVTLEPCCHHGR TPPCTDLLIERGINKVFVGSRDPNPLVTGKGIKQLQAAGIEVITDFMREACDQLNPIFFHYMQTTSPYVLLKYAMTADGK IATATGESKWISGELARQNVQITRHQYSAIMVGVGTVLADNPMLNSRMPNAKQPIRVVCDSHLRTPLACQLVQTARQYPT IIATASTDSTKIAQLKAFGVQIIQCKVANKQVDLVDLLAKLGAMQIDSVLLEGGSTLNFSALKAGVVNRIHCYIAPKLLG GSTAKSPIGGAGILQLAEAVNLTLKSTQYIGDDILLDYDVSSSQKLAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 3e-42 | 42 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 3e-42 | 42 |
