Gene Information

Name : metC-1 (GSU0944)
Accession : NP_951998.1
Strain : Geobacter sulfurreducens PCA
Genome accession: NC_002939
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase/beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1014275 - 1015408 bp
Length : 1134 bp
Strand : +
Note : -

DNA sequence :
ATGAACATCGCGACGCAGGCAGCACAGATCGGTCTCGACTGGGATACCCGCACCGGGGCGGTGACGGTACCCATCTACCA
GACGGCAACCTTCCGGCATCCGGGATTGGGCCAGAGCACGGGCTACGATTATTCCCGCTCCGGCAACCCCACCCGCCAGG
CCCTGGAAGAGGGGATCGCCCGGCTGGACGGCGGCGCCAGGGGATTTGCCTATGCCTCGGGCATGGCTGCCATCGCCAAT
CTCCTCCTGCTCTTCAAGAGCGGCGACCACCTGGTGGTGACCGAGGACCTCTACGGCGGCACCTGCCGTCTCTTCGACCA
GATTCTGGTCCAGTACGGCCTCTCGTTCACCTATGTGGACACGAGCGATCCTGAGGCGGTGCGGGACGCCATCCGTCCCG
AGACCAGGGCCCTGTTCGTGGAGTCCCTCACCAACCCGCTCCTCAAGGTCGCCGATATCGCGGCCCTCTCGACCCTCTGC
CGCGAGCGGGGGCTGCTTTGTATCGTGGACAACACCTTCCTCACTCCCTATCTTCTGCGGCCCCTGGATCTCGGGGCCGA
CATCACGGTCTACAGCGGCACCAAGTACCTGTCCGGGCACAACGACACGGTGTCGGGGCTGGTCGTGGTCAAGGAGCCGG
CCCTGGCCGAGCGGGTCTACTTCCTCCAGAATTCCGTGGGCGCAGTGCTGGGGCCCCAGGATGCGTGGCTCACCATCCGG
GGGATGAAGACCCTGTCGGTGCGACTGGACCGCCAGCAGGAAAACGCCGGCCGGATCGCCGAATGGCTGGCGCGGCATCC
GCGGGTGCCACGGGTCTTCTATCCGGGGCTGCCGGGCCATCCGGGCCACGAACTGCTGGCGCGCCAGGCCCGGGGCTTCG
GCGCCATGATCGCTTTCGAGGTGGATGATAAGGCTCTGGTGGAGCGTTTGCTCCTCAAGACGGAATTGATATCATTCGCG
GAAAGCCTCGGCGGCGTTGAAACCCTGATCACCTTTCCCCAGGTTCAGACCCATGCGGACATCCCGCCGGAGGTTCGGGA
GCGGCTCGGCATCAATGACGTGCTCCTGCGCCTTTCGGTGGGGATCGAGGATGCGGACGACCTTATCGCCGACCTGTCCC
GGGCATTCGCGTAA

Protein sequence :
MNIATQAAQIGLDWDTRTGAVTVPIYQTATFRHPGLGQSTGYDYSRSGNPTRQALEEGIARLDGGARGFAYASGMAAIAN
LLLLFKSGDHLVVTEDLYGGTCRLFDQILVQYGLSFTYVDTSDPEAVRDAIRPETRALFVESLTNPLLKVADIAALSTLC
RERGLLCIVDNTFLTPYLLRPLDLGADITVYSGTKYLSGHNDTVSGLVVVKEPALAERVYFLQNSVGAVLGPQDAWLTIR
GMKTLSVRLDRQQENAGRIAEWLARHPRVPRVFYPGLPGHPGHELLARQARGFGAMIAFEVDDKALVERLLLKTELISFA
ESLGGVETLITFPQVQTHADIPPEVRERLGINDVLLRLSVGIEDADDLIADLSRAFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-84 45
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 6e-85 45
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-71 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metC-1 NP_951998.1 cystathionine gamma-synthase/beta-lyase BAC0207 Protein 4e-59 43