|
Name : GSU0046 (GSU0046) Accession : NP_951108.1 Strain : Geobacter sulfurreducens PCA Genome accession: NC_002939 Putative virulence/resistance : Unknown Product : transposase of ISGsu6, IS21 family Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 61245 - 62270 bp Length : 1026 bp Strand : + Note : - DNA sequence : ATGATCGGAAAGGAAGAGTGTATGGAAGTCAGAATTCTCAAGAAGCAGGGCAAGAGCATCCGGGAGATCTCGCGTATCAC CGGACTTTGCCGCAACACGGTCAGGAAATTCCTCAGGTCGACCGCTGATCCCAGGTACAAAGAACGAGCGAAGCGACCGG GGAAGCTTGACCCATTTAAAGCGTTTCTCGAAGAACGGGTGAAGGCGGCTCTGCCGCATCGGATTCCCGCGCCGGTGCTT GCTCGGGAGATCAAAAGCTTTGGCTACGATGGCGGCGAACGCACTGTCAGAACGTTTTTGGCGACCCTTTATTCCCGCAT CACGCCGGAACCCGTTGTCCGGTTCGAAACGGAGCCAGGCAAGCAGATGCAAGCCGACTGGTGCGAACTGCGCAAGGGCA AGCACCCGCTGTACGCATTCGTTGGAACGCTTGGTTTCAGTAGAGATTCGTTCGTTGTCTTCACCACCAGCCAAGCGTTC GACGTCCTTCGGGAATGCCACGAGATGGCATTCTCCTTCTTCGGCGGGGTCCCGCGCGAAGTGCTCTATGACAACATGAA GACCGTCGTGCTGGAGCGAAACGCCTTCGGCGAGGGCAACCACCGTTTCCACACCGGCCTGTGGGACACGGCAAAGCATT TCGGGTACATCCCCCGGTTGTGCAAGCCGTACCGGGCCAAGACCAAGGGAAAGGTTGAGCGGTTCAACCGCTACCTGCGG TACAGCTTCTACTACCCGTTGGTTTCGCGCCTGAAGCAGGCAGGACTAACTCTCGATGTCGCAACCGCGAACATCGAGGT CAGAAAGTGGCTCAACGAAGTAGCCAACTGCCGCATCCATGGGGAGACCGGCGAACGCCCCTGCGATCGGCTCGAGATCG AGCGGTCAGCGATGCTGCCGCTGCCGCCAAGGCTTGCAGTCGAGCCGGACAAGCCGCAAGTCATTGCTGCCATGCCGTGG CCGGTTATTCCCCTTCAGCGCCCCGCCTCCTTCTACGATCAGATCCTTCAGGAGGGGCGGCTATGA Protein sequence : MIGKEECMEVRILKKQGKSIREISRITGLCRNTVRKFLRSTADPRYKERAKRPGKLDPFKAFLEERVKAALPHRIPAPVL AREIKSFGYDGGERTVRTFLATLYSRITPEPVVRFETEPGKQMQADWCELRKGKHPLYAFVGTLGFSRDSFVVFTTSQAF DVLRECHEMAFSFFGGVPREVLYDNMKTVVLERNAFGEGNHRFHTGLWDTAKHFGYIPRLCKPYRAKTKGKVERFNRYLR YSFYYPLVSRLKQAGLTLDVATANIEVRKWLNEVANCRIHGETGERPCDRLEIERSAMLPLPPRLAVEPDKPQVIAAMPW PVIPLQRPASFYDQILQEGRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| y1093 | YP_002346890.1 | transposase for insertion sequence IS100 | Not tested | HPI | Protein | 2e-78 | 51 |
| y2411 | NP_669718.1 | transposase | Not tested | HPI | Protein | 2e-78 | 51 |
| YPTB1585 | YP_070113.1 | transposase | Not tested | HPI | Protein | 2e-78 | 51 |
| unnamed | CAA21403.1 | - | Not tested | HPI | Protein | 2e-78 | 51 |
| unnamed | CAB46599.1 | IS100 transposase | Not tested | HPI | Protein | 1e-78 | 51 |
| api83 | CAF28557.1 | transposase | Not tested | YAPI | Protein | 1e-78 | 51 |
| y1094 | CAD42088.1 | OrfA protein of IS100 transposase | Not tested | PAI II 536 | Protein | 7e-79 | 49 |
| orfA | CAE85182.1 | OrfA protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 7e-79 | 49 |
| y1094 | CAC43410.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 7e-79 | 49 |
| s0035 | CAD33773.1 | ORF A protein | Not tested | PAI I 536 | Protein | 7e-79 | 49 |
| y1093 | CAD33720.1 | ORF A protein | Not tested | PAI I 536 | Protein | 2e-78 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GSU0046 | NP_951108.1 | transposase of ISGsu6, IS21 family | VFG1626 | Protein | 4e-79 | 49 |
| GSU0046 | NP_951108.1 | transposase of ISGsu6, IS21 family | VFG1607 | Protein | 4e-79 | 49 |
| GSU0046 | NP_951108.1 | transposase of ISGsu6, IS21 family | VFG1514 | Protein | 4e-79 | 49 |
| GSU0046 | NP_951108.1 | transposase of ISGsu6, IS21 family | VFG1461 | Protein | 1e-78 | 48 |
