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Name : tssH (GSU0433) Accession : NP_951492.1 Strain : Geobacter sulfurreducens PCA Genome accession: NC_002939 Putative virulence/resistance : Virulence Product : type VI secretion system ATPase TssH chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 462304 - 464931 bp Length : 2628 bp Strand : + Note : - DNA sequence : GTGCTGACCGTCGACCTTACCGCTCTTCTCAAGCGACTCAACCCCCTCTGCACCCGGGTACTGGAGGGGGCCGCAGGACT CTGCGTGGCCAGAGGGCACTACGAAGTGACTGTTGAACACTTCCTGGCCAGGTTGCTCGATGAGGCGGGGGGGGACCTTG TTGCCGTTCTGCGGAACTCTAACATCGACGCCTCCCCGCTGAAGATCGGAGTCGTCCGGGTTCTCGACGAGTTGCCCACC GGCAACGGGGGGCGGCCGGTCTTCTCCCCGATCCTCCTGGAGTGGCTCCAGGCGGGGTGGCTCACGGCCTCCCTCGATCT GAACGAGGAGCGGGTCCGCTCCGGAGCGCTCTTCGCGGCGCTCTTGGCCCGGCCGCTGCGGTTCGCGGCGGGCCGCTACG TGGACCAGCTCATGCCCGTGGGACGGGAGGGGCTTCTCTCCGGCTTTTCGCGCGCTGTTTCCGGCTCGGAGGAGAACTCC TGCATGGGCGGCGACACCGCTTCCGTCGCCGGGCCCGGCCGGGATGGCACGGCACTTTCCCGCTTCTGCACCGACTTCAC CGCACGAGCGGCCGAGGGGGGCATGGACCCGGTCTTCGGCCGTGATCGGGAGATCGGCCGGATGATCGACATCCTGGCCC GGCGGCGGAAGAACAACCCCATCGTGGTGGGAGAGGCGGGGGTCGGCAAGACCGCCGTGGTGGAGGGGCTGGCACTCCGT ATCGTTGAGGGGGAGGTGCCGGAGGCATTGCGGGAGGTGAGGCTCCTGGGGCTTGATCTCGGCCTGCTCCAGGCGGGGGC AGGGGTGAAAGGGGAGTTCGAGAGCCGTCTGAAGAGCGTTATCGAAGAGGTAAAGGGGGCTTCCCGGCCGGTGATTCTCT TTATCGATGAGGCCCACACCCTGATCGGTGCCGGCAACCAGGCGGGCGGGGGTGATGCCGCCAACCTTCTGAAGCCGGCC CTGGCCCGGGGTGAGCTGCGCACCATAGCCGCCACCACCTGGAGCGAATACAAGAAATATTTCGAGAAGGATGCCGCCTT GGCCAGGCGCTTCCAGCCGGTGAAGCTGGACGAACCGTCGGTGGAGACGGCGGTGCTGATCCTGCGGGGCCTCAAGGATA CGTACGAGGCGGCCCATGGGGTCACCATCCGGGATGACGCAGTCCGGGCGGCGGCGGAGCTCTCGTCCCGCTACCTGTCG GGCCGGCAGCTGCCGGACAAGGCGGTGGATCTCCTTGATACGGCTGCGGCCCGGGTGAAGCTCCTGCTCACCGGCAAGCC GGGAAGGGTAGAGGAGGCGGAGCGGCGCATCCAGGCCCTGGAGCGGGAAGAGGCCGCCCTCCGCCGTGATCGGCTCCAGG GGCGGCCGGAGGACGAAGGACGGCTGGCGGTGCTGAAGGAGGAGCTGGCGCTGTTGCGGGAGGAGCTGGCTGCCGTAACG GCTCGCTGGCACCGGGAACGAGAGCTGGCCGGGGCGGTGGTGGCCCTGCGGAACGAGGCAGCGGAGGGCCGTGACGCAGG TGGGGACGCAGTGGGGCTGAAGATGGCGGAACCCGCGGCAAAGCTGGCGGAAGTCCAGGGGGATGAGCCGCTGGTCAGGA TCGAGGTGGACCCGGAGGTGGTTGCGCAGGTGGTGGCCGACTGGACCGGCATTCCCCTAGGGCGCCTCCGCAAGGACCGG ACCGCCGGGGTGCTTGCCCTGGAAGAGGGCCTGCGCCGGCGCATCCGGGGGCAGGAACCGGCGCTGGCCGCCGTGGCCGA GGTGCTCCGTTCCTCGGCTGCTGGCCTCAAGGACCCGCGCCAGCCTCTGGGGGTCTTCCTGCTTGTCGGCCCCTCCGGCG TCGGCAAGACCGAAACCGCCGTGGCCGTGGCCGATCTTCTTTTCGGCGGCGAACGGTTCCTCACCGTCATCAACATGAGC GAATTTCAGGAGCGCCACACCACCAGCCGTCTCATCGGCTCGCCGCCGGGGTACGTGGGGTATGGTGAGGGCGGCGTCCT TACCGAGGCGGTCCGCCGCAGCCCCTACTCGGCGGTGCTGCTGGACGAGGTGGAAAAAGCCCACCCCGACGTCCTCAATC TCTTTTACCAGGTGTTCGACAAGGGGATGCTGGCCGACGGGGAGGGGCGGGTGATCGACTTCGCCAACACGGTCATCTTT CTGACGAGCAATCTGGCGGCGGATGTCGTCGTCTCGCGCTGCGCGGAAGAGCCGCAGCCCACGACAGAGGAGCTGGCCGC CGCCATCCGCCCCCATCTCGCGCGGCACTTCAAACCGGCGCTCCTGGCCCGCATGACCGTGGTCCCCTACCTGACCCTGG CGCCGGACAGCCTGGAGGAGATCGTGGGCCTCAAGCTCGGCCGGGTGGCGGAGCGGCTCCGGGAGAACAGCCGAACGGAG CTTGCGTGGACCCCGGCGGTTGCGGCCCGGCTCGCTGCCCGTTGCTCCGAAGTGGAGAGCGGCGCCAGGGCCATCGACCA TATCCTGCGCGGAACCCTCCTGCCGCTCCTCTCCCGGGAGATCCTGGCGCGGATCGGCGGAGGAGAGGAGCTGGAGGCAA TCCGGCTCGATGTAGCAGCCGACGGTTCCTTTACCGTCGGCTGTGGGGACGGTGCGGCGGTCCGGTGA Protein sequence : MLTVDLTALLKRLNPLCTRVLEGAAGLCVARGHYEVTVEHFLARLLDEAGGDLVAVLRNSNIDASPLKIGVVRVLDELPT GNGGRPVFSPILLEWLQAGWLTASLDLNEERVRSGALFAALLARPLRFAAGRYVDQLMPVGREGLLSGFSRAVSGSEENS CMGGDTASVAGPGRDGTALSRFCTDFTARAAEGGMDPVFGRDREIGRMIDILARRRKNNPIVVGEAGVGKTAVVEGLALR IVEGEVPEALREVRLLGLDLGLLQAGAGVKGEFESRLKSVIEEVKGASRPVILFIDEAHTLIGAGNQAGGGDAANLLKPA LARGELRTIAATTWSEYKKYFEKDAALARRFQPVKLDEPSVETAVLILRGLKDTYEAAHGVTIRDDAVRAAAELSSRYLS GRQLPDKAVDLLDTAAARVKLLLTGKPGRVEEAERRIQALEREEAALRRDRLQGRPEDEGRLAVLKEELALLREELAAVT ARWHRERELAGAVVALRNEAAEGRDAGGDAVGLKMAEPAAKLAEVQGDEPLVRIEVDPEVVAQVVADWTGIPLGRLRKDR TAGVLALEEGLRRRIRGQEPALAAVAEVLRSSAAGLKDPRQPLGVFLLVGPSGVGKTETAVAVADLLFGGERFLTVINMS EFQERHTTSRLIGSPPGYVGYGEGGVLTEAVRRSPYSAVLLDEVEKAHPDVLNLFYQVFDKGMLADGEGRVIDFANTVIF LTSNLAADVVVSRCAEEPQPTTEELAAAIRPHLARHFKPALLARMTVVPYLTLAPDSLEEIVGLKLGRVAERLRENSRTE LAWTPAVAARLAARCSEVESGARAIDHILRGTLLPLLSREILARIGGGEELEAIRLDVAADGSFTVGCGDGAAVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-130 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tssH | NP_951492.1 | type VI secretion system ATPase TssH chaperone | VFG2084 | Protein | 2e-157 | 49 |
