|
Name : serS (GSU0037) Accession : NP_951099.1 Strain : Geobacter sulfurreducens PCA Genome accession: NC_002939 Putative virulence/resistance : Unknown Product : seryl-tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 47405 - 48673 bp Length : 1269 bp Strand : + Note : - DNA sequence : ATGCTTGACGCCAAATATCTGCGGGAGAATCTGGAAGAGGTGGAGGCGCGGCTTGCCACCCGGGGCTCCGAGGTGAGTCT CGGCCGGTTTCGCGAGTTGGACGAGCGTCGGCGCGCGCTCCTCACGGAGAGCGAATCACTCAAGGCGTTGAAAAACTCCG TGTCCGAAGCCATCAGCAAGGTCAAGGACAAGAGCCAGATTCAGGATAAGATCGCCGAGATGCGTGAGGTGGGGGTAAGG ATCAAGGGGCTCGACGACGAGTTGCGCGGCATCGAGGACGAGCTGCAGATGGTACTGCTGACGGTCCCCAATGTGCCGCA TCCGACGGTACCCGTCGGAGCGTCGGAGGCGGACAATCGTCAGGTGCGGACATGGGGTGAGCCTCCCTGTTTTGCGTTTG ACCCCAAGCCCCATTGGGAGATAGGCGAAGGGCTCGGCATTCTTGATTTTGAGCGGGGAGCGAAGCTTACCGGTGCCCGG TTCACGCTCTATCGTGGTGCAGGTGCCCGATTGGAGCGCGCTCTCGTCAATTTCATGCTCGACCTGCACACCGAGCGGCA CAATTATCTTGAAATGCTCCCGCCCTTCGTGGTAAACAGGGAAAGCATGACCGGAACCGGTCAGCTGCCCAAGTTTGAGG ACGACCTCTTCCACCTGGAAGGGGTCGATTATTTCCTCATCCCCACGGCAGAGGTTCCCGTCACCAATATTCATCGCGCT GAAATCCTCAAAGCTGCAGACCTGCCGCTCAGCTACACGGCCTACACTCCGTGCTTCCGCAAGGAGGCCGGCTCCTACGG CAAGGACGTCCGCGGACTCATACGGCAACACCAGTTCAACAAGGTCGAGCTGGTGAAGTTTGTTCATCCCGCGACATCCT ACGATGAGCTGGAAAAACTGCTCTCCAATGCCGAAGAGGTGTTGCGCCAGCTCGGACTGGCCTATCGGGTCGTTGAACTC TGTACCGGCGATATGGGGTTTTCGGCTGCCAAGACATACGATATTGAAGTCTGGCTTCCCGGCCAGGAGACCTATCGGGA AATTTCTTCGTGCAGCAACTTCGAGGATTTCCAGTCCCGGCGGGCCTCGATCCGGTTCCGGGAAGACGAAAAATCAAAGC CTGAATTCGTCCACACGCTGAACGGTTCGGGGCTTGCAGTCGGTAGAACGCTGGTGGCCATCCTTGAGAATTACCAGCAG GAAGACGGGTCGGTAGTAATCCCGGACGTGCTCCGGCCGTACATGGGGGGACTGCAGAAGATCGGCTAG Protein sequence : MLDAKYLRENLEEVEARLATRGSEVSLGRFRELDERRRALLTESESLKALKNSVSEAISKVKDKSQIQDKIAEMREVGVR IKGLDDELRGIEDELQMVLLTVPNVPHPTVPVGASEADNRQVRTWGEPPCFAFDPKPHWEIGEGLGILDFERGAKLTGAR FTLYRGAGARLERALVNFMLDLHTERHNYLEMLPPFVVNRESMTGTGQLPKFEDDLFHLEGVDYFLIPTAEVPVTNIHRA EILKAADLPLSYTAYTPCFRKEAGSYGKDVRGLIRQHQFNKVELVKFVHPATSYDELEKLLSNAEEVLRQLGLAYRVVEL CTGDMGFSAAKTYDIEVWLPGQETYREISSCSNFEDFQSRRASIRFREDEKSKPEFVHTLNGSGLAVGRTLVAILENYQQ EDGSVVIPDVLRPYMGGLQKIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-116 | 58 |
