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Name : tssC (GSU3173) Accession : NP_954214.1 Strain : Geobacter sulfurreducens PCA Genome accession: NC_002939 Putative virulence/resistance : Virulence Product : type VI secretion system needle sheath protein TssC Function : - COG functional category : S : Function unknown COG ID : COG3517 EC number : - Position : 3481689 - 3483173 bp Length : 1485 bp Strand : + Note : - DNA sequence : ATGAGCTCAGAGATGAACGGCACTGCCCCCTTTCAGGACCAGGGTGCGACTGACGTGTCGCTTTTGGAGGATATCGTCCG GGTCACTAAACTTCAACCGGCCGACGAAGCTTACTCTATCACCAGAAGAGGGGTCGCGGCCCTCATGGCCCAGCTTCTGG AGCCGGGAGCCGAAGCCCGGAAGGTATCCAAAGCAGTGCTTGATGACATGATCGCCGAAATCGACCGCAAGCTCTCCCTC CAGATGGACGAAATCCTCCACCACCCCCAGTTCCAGGCACTTGAATCATCCTGGCGTTCGCTCCACTTCCTGGTAGATCG AACCGACTTCAGGGAAAACAACCGGATCGAATTCCTGAACGCCACCAAGGAGGAACTGCTGGACGACTTCGAGGACGCGC CCGAGGTGGCCAAATCGGGCCTCTACAAGACCGTTTACTCCGCCGAGTACGGTCAGTTCGGCGGTAAGCCGTTCGGAGCG ATCATCGGCAACTACGACTTCGGTCCGGGGGCCCAGGACATAAAGCTCCTCCAGAGCCTGGCTGCCGTAGCCGGGATGGC CCACGCCCCCTTCATGGCCGCCGCATCTCCCCAGTTCTTCGGCTGTGATGACTTCACCGCCCTGCCGAATCTCAAAGACA TCTCATCGATCCTCGAAGGCCCCCAGTACGCCAAGTGGCAAGCGTTCCGCGAGAGCGAAGATGCCCGCTACGTGGGACTG GCCCTGCCCCGGTTCCTCCTGCGACTCCCCTACGGCGAGGCCACCAGGCCGGCCAAGTGTTTCAACTACGAAGAACAGGT CTCCGACAGCCACGACCGCTACTGCTGGGGCAACGCAGCCTTCGCCTTCGCCACCCGGCTCACCGAGAGCTTTGCCAACT TCCGCTGGTGCGCCAACATCATCGGTCCCCAGGGTGGCGGAACGGTGCATGACCTGCCGCTCCACCAGTACCAGGCAATG GGAGCCATCCAGACCAAGATCCCCACCGAAGTGCTCATCAGCGAGCGCCGCGAATTCGAGCTGGCCGAAGGAGGGTTCAT TGCCCTTACCATGCGAAAAGGCAGTGACAATGCCGCCTTCTTCTCCGCGAACTCGGTCCAGAAACCGAAATTCTTCGGCA GCTCCAAGGAGGGAAAAGAGGCCGAGCTCAACTACAAGCTGGGGCTCCAGCTCCCCTATATGTTCATCGTCAGTCGCCTC GCCCACTATCTGAAGGTGATCCAGCGGGAGCACATCGGCACGTGGAAGGAACGGGGCGATCTGGAGAATGAGCTCAATCT GTGGATTCGTCAGTACGTCTCCGAGATGGACAACCCCATGCCCGGCGTTCGCAGCCGCCGTCCCCTGCGCCAGGCCGAAG TGACCGTTGAGGAAGTCCCGGGCGAACCGGGCTGGTACCGGGTGGGCCTCAAGGTCACCCCTCACTTCAAGTACATGGGG GCATACTTCACGCTGTCACTGGTGGGGAAACTGGATAAAGAGTAG Protein sequence : MSSEMNGTAPFQDQGATDVSLLEDIVRVTKLQPADEAYSITRRGVAALMAQLLEPGAEARKVSKAVLDDMIAEIDRKLSL QMDEILHHPQFQALESSWRSLHFLVDRTDFRENNRIEFLNATKEELLDDFEDAPEVAKSGLYKTVYSAEYGQFGGKPFGA IIGNYDFGPGAQDIKLLQSLAAVAGMAHAPFMAAASPQFFGCDDFTALPNLKDISSILEGPQYAKWQAFRESEDARYVGL ALPRFLLRLPYGEATRPAKCFNYEEQVSDSHDRYCWGNAAFAFATRLTESFANFRWCANIIGPQGGGTVHDLPLHQYQAM GAIQTKIPTEVLISERREFELAEGGFIALTMRKGSDNAAFFSANSVQKPKFFGSSKEGKEAELNYKLGLQLPYMFIVSRL AHYLKVIQREHIGTWKERGDLENELNLWIRQYVSEMDNPMPGVRSRRPLRQAEVTVEEVPGEPGWYRVGLKVTPHFKYMG AYFTLSLVGKLDKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 8e-141 | 60 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 6e-141 | 60 |
| HH0247 | NP_859778.1 | hypothetical protein | Not tested | HHGI1 | Protein | 3e-137 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tssC | NP_954214.1 | type VI secretion system needle sheath protein TssC | VFG2475 | Protein | 9e-165 | 68 |
| tssC | NP_954214.1 | type VI secretion system needle sheath protein TssC | VFG2093 | Protein | 7e-155 | 64 |
