Gene Information

Name : kdpE (GSU2484)
Accession : NP_953530.1
Strain : Geobacter sulfurreducens PCA
Genome accession: NC_002939
Putative virulence/resistance : Virulence
Product : winged-helix transcriptional response regulator KdpE
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2727475 - 2728179 bp
Length : 705 bp
Strand : +
Note : domains: REC, trans_reg_C

DNA sequence : 
ATGGGCCATGAAGCGAACGCCATCAACCGGCCGCGGATCCTGATCGTGGACGACGAAGCGGCGATCCGCCGCTTTCTCCG
CACCGTCCTCGACGCGGAGGAGTTCTCGCTCCACCAGGCCGAAACGGGTCACGCCGCGCTGGCCGCAGCCGCGGCCATCC
GGCCCGATCTCATCCTCCTGGATCTGGGGCTGCCGGACCTGGACGGGGTGGAGGTCATCAGGCGGATCAGGGAGTGGTCG
CCGGTGCCGATCATCGTGCTGTCGGTCCGGGAGCGGGAGGACGACAAGGTGCATGCCCTGGATGCCGGGGCGGACGACTA
CCTGACCAAGCCCTTCGGCATCGGGGAACTGCTGGCGAGGATGCGGGTGGTACTGCGCCGCTCCATCCGGCAGGCGCCCG
AACCGATCTGCCGGATCGGCGGGCTTGAGGTGGATCTGCCGCGCCGCCGCGTGACCGTGGACGGAGTCGAGGTACAGCTC
ACCCCCACCGAGTACGAGCTGCTGCGCCTCCTGGCGGTCCACGCCGGCAAGGTCCTGACCCACAGCCAGATCCTCCGGCA
GATCTGGGGGGTTGCCCATGTGGAACAGCCCCATGTGCTGCGGGTGAACATCAGCAATCTCCGCCGCAAGATCGAGTCCG
ATCCCACGCGCCCCCGCTACCTCCTGACCGAGCCCGGGGTCGGCTATCGTTTGAAGGCCGAGTGA

Protein sequence : 
MGHEANAINRPRILIVDDEAAIRRFLRTVLDAEEFSLHQAETGHAALAAAAAIRPDLILLDLGLPDLDGVEVIRRIREWS
PVPIIVLSVREREDDKVHALDAGADDYLTKPFGIGELLARMRVVLRRSIRQAPEPICRIGGLEVDLPRRRVTVDGVEVQL
TPTEYELLRLLAVHAGKVLTHSQILRQIWGVAHVEQPHVLRVNISNLRRKIESDPTRPRYLLTEPGVGYRLKAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 1e-34 43
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 8e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE NP_953530.1 winged-helix transcriptional response regulator KdpE NC_012469.1.7685629. Protein 2e-26 43
kdpE NP_953530.1 winged-helix transcriptional response regulator KdpE NC_003923.1003417.p0 Protein 1e-28 42
kdpE NP_953530.1 winged-helix transcriptional response regulator KdpE NC_013450.8614146.p0 Protein 1e-28 42
kdpE NP_953530.1 winged-helix transcriptional response regulator KdpE NC_002951.3238224.p0 Protein 1e-28 42
kdpE NP_953530.1 winged-helix transcriptional response regulator KdpE NC_007793.3914065.p0 Protein 1e-28 42
kdpE NP_953530.1 winged-helix transcriptional response regulator KdpE NC_002758.1121390.p0 Protein 1e-28 42
kdpE NP_953530.1 winged-helix transcriptional response regulator KdpE NC_010079.5776364.p0 Protein 1e-28 42
kdpE NP_953530.1 winged-helix transcriptional response regulator KdpE NC_002952.2859858.p0 Protein 1e-28 42
kdpE NP_953530.1 winged-helix transcriptional response regulator KdpE NC_007622.3794948.p0 Protein 1e-28 42
kdpE NP_953530.1 winged-helix transcriptional response regulator KdpE BAC0083 Protein 3e-27 41
kdpE NP_953530.1 winged-helix transcriptional response regulator KdpE NC_012469.1.7686381. Protein 2e-23 41
kdpE NP_953530.1 winged-helix transcriptional response regulator KdpE AE000516.2.gene3505. Protein 4e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE NP_953530.1 winged-helix transcriptional response regulator KdpE VFG1390 Protein 2e-27 43