Gene Information

Name : aplC (GSU2352)
Accession : NP_953399.4
Strain : Geobacter sulfurreducens PCA
Genome accession: NC_002939
Putative virulence/resistance : Resistance
Product : sodium/solute symporter family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2572418 - 2574394 bp
Length : 1977 bp
Strand : -
Note : -

DNA sequence :
ATGAGAAAATGGATTGCCGGCATCACCCTGGCCCTCTCCCTGGGCTCGTTCGCCTTCGCTGAAGAGCCTGCCAAGGCTCC
GGCCGCCCCCGGCGCCCCGGCGGCCGCGACAGCGCCGGCCGCCACCGCCCCGGCTCCGGCGGCAACCGCTCCCGCCGCCA
CCGACGCCGCCAAAATGGCCACCCCGGCCTCGGCCGAGCCCAAGAAGATCAAGGCCAACCCGATGGTCACCATCCCCATC
TTCCTGATCATCATCGGTGTTACCATGGCCGTTGTCGTCTGGTCGGCCAAGAGGACCAAGTCGGCCGCCGACTTCTATAC
CGCCGGCGGCGGCATCACCGGCACCCAGAACGGCTGGGCCATTGCGGGCGACTACATGTCCGCGGCCTCCTTCCTGGGGA
TTTCCGGGATCATCTCCCTCTACGGCTACGACGGGTTCATGTACTCGGTAGGCTGGCTCGTGGCCTACATCACGGTGCTC
CTGATCGTGGCAGAGCCCTGCCGCAACGCGGGCAAGTACACCCTGGGCGACATCCTCTCCTTCCGCACCGAGCCCAAACC
GGTCCGGGCAGTTGCGGCTCTTTCGACCGTGACGGTCTCCACCTTCTACCTGACCGCGCAGATGGTCGGCGCCGGCAAGC
TGATGCAGTTGCTGATCGGGATTCCCTACAAGTTCGCCATCATCGGCGTCGGTATCCTCATGGTCGGCTACGTCGTGTTC
GGCGGCATGACCGCCACCACCTGGGTCCAGATCATCAAGGCCGGCCTCCTCATGTCCGGCGCATTCCTGCTCTCGATCCT
AGTCGGCCTCAAGTCGGGCATGAGCCCGTTCCAGTTCTTCACCGACATTGCCACCAGCCCCAACATCATCGAGCACGTCC
AGAAGGTGGTTCTCAAGGACCCCGTCGCCGTGGCGGGCTTCGATTACGGGCAGCGCTTCCTCGAGCCAGGCCTCTTCCTG
AAGCAGCCCCTCGACCAGATCTCCCTCGGCATGGCCCTGGTGCTCGGCACCGCCGGCATGCCCCACATCCTGATGCGCTT
CTTCACCGTGCCCACGGCCCAGGCCGCCCGCAAATCCGTTATCGTGGCCATGTTCATCATCGGCTCCTTCTACATCCTGA
CCACGCTTCTCGGCTTCGGCGCCGCCATCCACGTGACTCCGCAAGCCATTTCCAAGGTCGGTAAAGGCGGCAACATGGCT
GCCATGATGCTGGCCCAGCAACTGGGCGGCGACATCTCCCCGTTCATCGGCGACCTGCTTCTGGCGTTCCTGTGCGCCGT
TGCCTTCGCCACCATCCTGGCCGTGGTGTCGGGTCTGGTTCTGGCCGCTTCCGCCGCCATCGCCCACGACATCTACGTGA
ACGTCATCAAGGACGGCCACGCCGACCAGCACGAGCAGGTCATGGCCGCCCGGATCACCTCCCTCTGCGTCGGCGCCGCC
GGCATTGTCATCGGCATCGCGGCCGAGAATCAGAACGTTGCCCACCTGGTGGCCCTGGCCTTCGCCGTTGCCTCCTCGGG
CAACCTGCCGGTCGTCGTCATGTCCCTCTTCTGGCGCAAGTTCAACACCGCCGGCGTCATCTCGGGTCTGGTGGTCGGCA
CCGTGGCTGCCATCGCCCTGGTGATGATCTCCCCCAACATGACCTATCCGAAGAAGGTTGCCGCCGACGCCCAGAAGGTG
GTTACGGTTCTGGAGAAGAAGCAGGCCGACGGCGCGGTCCTCACCGAGAAGGAGATGAAGGACCTCGACAAGGCCAAGGC
CGACTACGAGAAGAACAAGGACGGCAAGTCCATGCTCGGCCTGGACGCACCGCTCTTCCCGCTCAAGAACCCGGGCATCA
TCTCGATCCCGCTGGGCTTCCTCGCCGCGATCATCGGTTGCCTGGCCTTCCCGAGCCGGCGTTCCGAGGAAATGTTCGAC
GAGATCTACGTCCGCCAGAATACCGGCATCGGCATGGCCAAAGCCGTCGACCACTAG

Protein sequence :
MRKWIAGITLALSLGSFAFAEEPAKAPAAPGAPAAATAPAATAPAPAATAPAATDAAKMATPASAEPKKIKANPMVTIPI
FLIIIGVTMAVVVWSAKRTKSAADFYTAGGGITGTQNGWAIAGDYMSAASFLGISGIISLYGYDGFMYSVGWLVAYITVL
LIVAEPCRNAGKYTLGDILSFRTEPKPVRAVAALSTVTVSTFYLTAQMVGAGKLMQLLIGIPYKFAIIGVGILMVGYVVF
GGMTATTWVQIIKAGLLMSGAFLLSILVGLKSGMSPFQFFTDIATSPNIIEHVQKVVLKDPVAVAGFDYGQRFLEPGLFL
KQPLDQISLGMALVLGTAGMPHILMRFFTVPTAQAARKSVIVAMFIIGSFYILTTLLGFGAAIHVTPQAISKVGKGGNMA
AMMLAQQLGGDISPFIGDLLLAFLCAVAFATILAVVSGLVLAASAAIAHDIYVNVIKDGHADQHEQVMAARITSLCVGAA
GIVIGIAAENQNVAHLVALAFAVASSGNLPVVVMSLFWRKFNTAGVISGLVVGTVAAIALVMISPNMTYPKKVAADAQKV
VTVLEKKQADGAVLTEKEMKDLDKAKADYEKNKDGKSMLGLDAPLFPLKNPGIISIPLGFLAAIIGCLAFPSRRSEEMFD
EIYVRQNTGIGMAKAVDH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 5e-69 48
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 1e-58 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aplC NP_953399.4 sodium/solute symporter family protein BAC0564 Protein 1e-66 45