|
Name : lysS (GSU2271) Accession : NP_953320.1 Strain : Geobacter sulfurreducens PCA Genome accession: NC_002939 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 2487380 - 2488855 bp Length : 1476 bp Strand : - Note : - DNA sequence : ATGGAAGAGTTGAGTGAGCTGTTGCTCCAGAGGCGGCGCAAGGTCGACGCCCTCTGGGAAGCGGGGATCAATCCCTACCC GAATGATTTCAAACCTCTCCATACGTCTGCCGATTTCAGGGAGGCCTATGGCACCGTGGATACCATTGAGGATGATCCCC GCAGCTTTACCGTCGCGGGCCGTATCATCGCGCGCCGCTCCTTCGGCAAGGCTGCGTTTATCCAGATCCAGGACCGTAAG GGACGGATGCAGGTCTACGTACGCAAGGATACGGTGGGCGACGAGGCGTTCGAGGCGTTCGAGACTTTCGATATCGGCGA CATCGTCGGTGTCGGCGGCACCCCGTTCCGGACCAAGACCGGCGAGCTCACTCTCAATGCCGCGTTCATCCGTCTCCTGA CCAAGTCGCTCCAGCCGCTTCCCGAGAAGTTCCACGGGCTCACGGACGTTGAGACGCGCTATCGCCAGCGCTACGTGGAC CTCATCGTGAACCCCGAGGTGCGCGAGGTGTTCGTCAAGCGGTCCCGCATCGTCAATCTCATCCGCGAATTCATGGTGCG CAAGGATTTTCTCGAAGTGGAAACGCCCATGATGCAGCCGATCCCCGGCGGTGCCACGGCGCGCCCCTTCGTGACCCACC ACAATGCCCTCGATATGCAGCTTTTTCTTCGGATCGCACCGGAGCTGTACCTGAAGCGGCTCGTGGTCGGCGGCTTCGAG CGGGTCTTCGAGATCAACCGTAACTTCCGCAACGAGGGGATTTCAGTGCGCCACAACCCCGAGTTCACCATGATGGAGTT CTATCAGGCCTACGCCACCTTTGAAGACCTGATGGATTTCACGGAGGAACTCCTCTGTCATGTTGCGCAGGAAGTGCTGG GCACCCTCGATTTCACCTACCAGGAGATGCCGATCAGCTTCCAGCGCCCCTGGAAGCGGCTCGCCGTTGTCGAGGCGATT CTGGAATACGGCGACATCGACGCCAAGTCCCTGGCGGACCGGGATCTGGCCTATGCCTACGCCCAGCGGCTGGGGCTCGA CCTGCCCGCCGACGTGGGGTACGGCAAGCTCATTACCGAGATTTTCGAGGAAGTGGCGGAAACAAAACTGATCCAGCCGA CGTTCATTACCGCCTATCCCACCGAAGTGTCACCCCTTTCCCGCAAGAGCGACAAGGATCCGGAGATCGTGGACCGGTTC GAGCTGTTCATTGCCGGTCGCGAGATGGCCAACGCCTTCTCCGAGTTGAACGACCCGGTGGACCAGAAGGAGCGCTTCCT CGCCCAGGTGGCGGCCAAGGCCAAGGGCGACGACGAGGCCCACTACATGGACGAGGATTACATCCGCGCGCTTGAGTTCG GCCTTCCCCCCACGGCGGGGGAGGGGATCGGCATCGACCGGCTCGTGATGCTGCTGACCGATTCACCTTCGATTCGCGAC GTCATTCTCTTTCCGCAACTACGCAAGGAAAAATAA Protein sequence : MEELSELLLQRRRKVDALWEAGINPYPNDFKPLHTSADFREAYGTVDTIEDDPRSFTVAGRIIARRSFGKAAFIQIQDRK GRMQVYVRKDTVGDEAFEAFETFDIGDIVGVGGTPFRTKTGELTLNAAFIRLLTKSLQPLPEKFHGLTDVETRYRQRYVD LIVNPEVREVFVKRSRIVNLIREFMVRKDFLEVETPMMQPIPGGATARPFVTHHNALDMQLFLRIAPELYLKRLVVGGFE RVFEINRNFRNEGISVRHNPEFTMMEFYQAYATFEDLMDFTEELLCHVAQEVLGTLDFTYQEMPISFQRPWKRLAVVEAI LEYGDIDAKSLADRDLAYAYAQRLGLDLPADVGYGKLITEIFEEVAETKLIQPTFITAYPTEVSPLSRKSDKDPEIVDRF ELFIAGREMANAFSELNDPVDQKERFLAQVAAKAKGDDEAHYMDEDYIRALEFGLPPTAGEGIGIDRLVMLLTDSPSIRD VILFPQLRKEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-128 | 57 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 5e-82 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | NP_953320.1 | lysyl-tRNA ligase | VFG1668 | Protein | 1e-128 | 57 |
