Gene Information

Name : lolD (GSU2269)
Accession : NP_953318.1
Strain : Geobacter sulfurreducens PCA
Genome accession: NC_002939
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2485366 - 2486040 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTAACCTCATCGAGGTTGTGGACCTCTGCAAGACCTACGGCGCCGGGGACACTCGCGTCGATGTGCTCAGGGGGGT
CAATCTGGCGGTTGCCGAAGGGGAAACCATTGCCCTGGTGGGGGCCTCAGGGGCCGGCAAGAGCACCCTCCTCCATCTTA
TGGGGACCTTGGACCGCCCTTCGTCAGGGTCGGTGCTGTTCGGCGGCGAAGATGTCTTCCGGAAAAGCGACATGGACCTG
GCCGCTTTCCGCAACCGCTCCATCGGCTTTGTGTTTCAGTTTCATCATCTGCTGCCGGAGTTCACGGCAGAGGAAAACGT
TATGATGCCGGCCCTGATCGGCGGCATGAAGCGATCCGCGGCGCTTGGCCCGGCCCGGGAACTGCTTTCGGAGGTCGGCC
TTGCCCACCGGCTCACCCACAAGCCGGGGGAGTTGTCCGGCGGGGAGCAGCAGCGGGTGGCCATCGCGCGGGCTCTGGTC
CTGTCGCCCCGGCTCCTGCTGGCCGATGAGCCGACTGGCAACCTGGACATGAAGACCAGCGACGAGGTTCATGAAACGCT
CTCCGAAATCAACCGGAAACGGGGCCTGACCCTGGTGGTCGTGACCCATAATGAGCGGCTCGCTTCCCGCATGGGACGGA
CTGTCCGGCTGGTGGACGGCCGCATCGAGGTGTAG

Protein sequence : 
MSNLIEVVDLCKTYGAGDTRVDVLRGVNLAVAEGETIALVGASGAGKSTLLHLMGTLDRPSSGSVLFGGEDVFRKSDMDL
AAFRNRSIGFVFQFHHLLPEFTAEENVMMPALIGGMKRSAALGPARELLSEVGLAHRLTHKPGELSGGEQQRVAIARALV
LSPRLLLADEPTGNLDMKTSDEVHETLSEINRKRGLTLVVVTHNERLASRMGRTVRLVDGRIEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-31 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 9e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD NP_953318.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 9e-43 46
lolD NP_953318.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-32 45
lolD NP_953318.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-35 44
lolD NP_953318.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-38 43
lolD NP_953318.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 9e-36 42