Name : GSU2121 (GSU2121) Accession : NP_953170.1 Strain : Geobacter sulfurreducens PCA Genome accession: NC_002939 Putative virulence/resistance : Virulence Product : lytic transglycosylase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0741 EC number : - Position : 2339486 - 2339992 bp Length : 507 bp Strand : + Note : - DNA sequence : ATGCGCTTCGCCACTCTAGTTTTCCTACTTTGCATATCTGTCGGTTCATCAAATCCGGCATCCGCCTTCTGTTTTGAAGA AGCCGGTAACAGGTACGGAATCTCGCCTCAACTCCTCTATGCAATCTCCAAGGGGGAAAGCAGCTTCAATCCCCTGGCAA TCAATTACAACTCAAACGGCACGTACGATTACGGCCTCATGCAGATCAATTCCTCATGGGAACCGGCTCTACGCAAACTC GGCATCTCGTGGAACAACCTTGCTGACCCATGCACCAATGTCATGGTTGGCGCCTGGGTTCTTTCCCAATGCATTCAGGA CTACGGATACACCTGGCAGGCTGTCGGCTGCTACAACTCCCGCACACCATCAAAACGTAATCGGTACGCCGCCAGAGTAG CTCGCATCATCAAACACGAACTATACCGTCCGCAACCTGTTCAGGTGGCTTCAGCAATCAACTTTGCCACTCCTTGGGAA GAAGCTTTTGGCCGTGAACACCGCTGA Protein sequence : MRFATLVFLLCISVGSSNPASAFCFEEAGNRYGISPQLLYAISKGESSFNPLAINYNSNGTYDYGLMQINSSWEPALRKL GISWNNLADPCTNVMVGAWVLSQCIQDYGYTWQAVGCYNSRTPSKRNRYAARVARIIKHELYRPQPVQVASAINFATPWE EAFGREHR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
etgA | AFO66324.1 | putative lytic transglycosylase | Not tested | SESS LEE | Protein | 1e-13 | 43 |
etgA | AFO66404.1 | putative lytic transglycosylase | Not tested | SESS LEE | Protein | 1e-13 | 43 |
iagB | NP_457271.1 | cell invasion protein | Virulence | SPI-1 | Protein | 7e-18 | 42 |
iagB | NP_806480.1 | cell invasion protein | Virulence | SPI-1 | Protein | 7e-18 | 42 |
iagB | NP_461798.1 | invasion protein precursor | Virulence | SPI-1 | Protein | 5e-18 | 42 |
iagB | YP_217796.1 | cell invasion protein | Virulence | SPI-1 | Protein | 4e-18 | 42 |
unnamed | AAK26704.1 | unknown | Not tested | LEE | Protein | 5e-11 | 41 |
ECO103_3629 | YP_003223486.1 | hypothetical protein | Not tested | LEE | Protein | 8e-11 | 41 |
ECO26_5260 | YP_003232142.1 | hypothetical protein | Not tested | LEE | Protein | 8e-11 | 41 |
unnamed | AAL57531.1 | unknown | Not tested | LEE | Protein | 5e-11 | 41 |
st13 | CAC81851.1 | ST13 protein | Not tested | LEE II | Protein | 5e-11 | 41 |
unnamed | CAI43885.1 | hypothetical protein | Not tested | LEE | Protein | 5e-11 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
GSU2121 | NP_953170.1 | lytic transglycosylase | VFG0539 | Protein | 1e-18 | 42 |