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Name : capL (GSU1942) Accession : NP_952991.1 Strain : Geobacter sulfurreducens PCA Genome accession: NC_002939 Putative virulence/resistance : Virulence Product : UDP-N-acetyl-D-galactosamine 6-dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 2126682 - 2127968 bp Length : 1287 bp Strand : - Note : - DNA sequence : ATGACCGCTGACCGCACCATTTCCGTTATCGGACTCGGCTACGTGGGACTCCCCGTGGCGGTTGCCTTCGGCCGTGTCCG TCGGACTGTCGGATTCGACATCAATGCCGGCCGCATCGCCGAGCTCAAGCAGGGGATCGATCGAACCGGCGAGGTGACTG CTGAGGCCCTGGCCGCAGCGAACATCCTTTTCACCGACCGCATCGAGGAACTCCGTCTGGCGGATTTTCACATCGTGGCG GTGCCGACTCCCATCGATGAAGCGAATCAGCCCGACCTTACCCTGATGCTGAAGGCGTCGGAAACGGTGGGTAAGGCCCT GAAGCAGGGCGACATCGTGGTGTACGAGTCCACAGTGTATCCCGGTGTCACTGAGGACGAGTGCGTGCCGATCCTGGAAC GGGTGTCGGGACTGCGCTGCGGCACCGATTTCACCGTGGGCTACAGCCCTGAGCGGATCAATCCGGGCGACAGGGAGCAT ACTTTCACGAAGATCACCAAAGTAGTGTCGGGGCAGGATGCTGCGACACTCGACGTAGTTGCCCGAGTGTATGAATCAGT GGTGACGGCGGGGGTTCACCGGGCGTCGAGCATCAAGGTGGCCGAAGCGGCCAAGGTGATTGAGAACACACAACGGGACC TGAACATCGCCCTCATGAACGAGTTGGCCCTGATTTTCGACCGGCTGGGCATCGACACTAGCGAGGTGCTGGAGGCGGCC GGAACCAAGTGGAACTTCCTCAGGTTCAAGCCGGGGCTCGTGGGAGGGCATTGCATCGGTGTGGATCCGTACTATCTGAC CCACAAGGCGGAGAAGATCGGTTACATCCCCCAGGTGATCCTGGCGGGCCGCAGGATCAACGACGGTATGGGCAAATTCG TGGCCCAGAAGACGGTGAAAGAGATGATCCTGGCCGGACACCCGGTTCTGGGAGCCAGGGTGACGGTGCTCGGCCTCACC TTCAAGGAGGATTGCCCTGACCTGCGCAATTCCCGAGTGATCGACATTATCCGCGAACTTGAGGAGTATGGTGTGAAGGT TCAGGTCTACGACCCCTTGGCCGACCCCAACGAGGCCCTGCATGAATACGGGGTGACGCTTGTGCCGGCAGATGGTCTGG AGCCTGCAGCTGCGGTGGTTGCCGCTGTGGCACACCGTCAGTTCCGGTCCCTGGCCGGGGATGACTTGCTTCGATTGATG GGGCACCCCCCGGTTCTCATGGACGTTAAGGGTATGTACGACCAGAACATGCTGCGGCAGGCGGGAATCCGCTTCTGGAG GCTCTGA Protein sequence : MTADRTISVIGLGYVGLPVAVAFGRVRRTVGFDINAGRIAELKQGIDRTGEVTAEALAAANILFTDRIEELRLADFHIVA VPTPIDEANQPDLTLMLKASETVGKALKQGDIVVYESTVYPGVTEDECVPILERVSGLRCGTDFTVGYSPERINPGDREH TFTKITKVVSGQDAATLDVVARVYESVVTAGVHRASSIKVAEAAKVIENTQRDLNIALMNELALIFDRLGIDTSEVLEAA GTKWNFLRFKPGLVGGHCIGVDPYYLTHKAEKIGYIPQVILAGRRINDGMGKFVAQKTVKEMILAGHPVLGARVTVLGLT FKEDCPDLRNSRVIDIIRELEEYGVKVQVYDPLADPNEALHEYGVTLVPADGLEPAAAVVAAVAHRQFRSLAGDDLLRLM GHPPVLMDVKGMYDQNMLRQAGIRFWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 8e-124 | 62 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-110 | 57 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-110 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capL | NP_952991.1 | UDP-N-acetyl-D-galactosamine 6-dehydrogenase | VFG0431 | Protein | 7e-111 | 57 |
