Gene Information

Name : xerD (GSU1819)
Accession : NP_952869.1
Strain : Geobacter sulfurreducens PCA
Genome accession: NC_002939
Putative virulence/resistance : Unknown
Product : integrase/recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1984908 - 1985795 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence :
ATGAATCAGCATCTGGATCTTTTTCTCGGCTATCTGGTGGTCGAGAAGGGGCTTGCCCGCAATTCGGTGGAGTCCTATGC
CAGGGACCTGAGCCGTTATCTGGGGTATGTCGAGCAGCACGCGGGAGGTGATCCTGCCGCAATCCGCCCCCTCCATGTTG
CGGATTTCCTGGCGCACCTCAAGGAGTCGGGACTCGGCGCCAGAAGCCGTGCCCGCGCCCTGTCCGCAGTACGGATGTTT
CACCGTTTCCTGCTGGTGGAAGGGTATGCCGAAACCAATCCCACCAGCATTATTGAAGCGCCCCGCGTTCTCGCCAAGCT
GCCCCAGGTCCTGACCGGCCGGGAGGTGGAGATGCTTCTGGCCGCGCCGGCCGGTGATGCCCCCATCGAGGTGCGTGACC
GGGCCATGCTGGAGCTTCTCTATGCAACGGGTCTCCGGGTTTCCGAACTGGTGGGGCTGCGCACGAGGGATGTGAATACC
TCAGCCGGTTACCTAATGACCGTGGGCAAGGGGGAAAAAGAGCGGCTGGTCCCCATGGGCGAATCAGCCTGTGCAGCCGT
AGTGCTCTATCTTTCCTCGGCTAGGATTCAACTGGGTCGGGGCGGGGAGAGTCCCTTTCTTTTCCTGAGCAGGCTCGGTG
AACGGATGACTCGCCAGGCCTTTTGGAATATAATAAAAAAGCGCTCAAGGCAGGCCGGCATTCTGAAGGGAATTTCGCCC
CACACGCTCAGGCATTCGTTCGCCACCCATCTGCTCGAAAACGGGGCGGACCTACGGAGCGTGCAGGCCATGCTCGGCCA
TGCGGATCTCTCAACAACCCAGATTTATACGCATGTTACCCGTGAACGGCTGAAGCGTCTGCACGAACAATTCCACCCGC
GCGGCTGA

Protein sequence :
MNQHLDLFLGYLVVEKGLARNSVESYARDLSRYLGYVEQHAGGDPAAIRPLHVADFLAHLKESGLGARSRARALSAVRMF
HRFLLVEGYAETNPTSIIEAPRVLAKLPQVLTGREVEMLLAAPAGDAPIEVRDRAMLELLYATGLRVSELVGLRTRDVNT
SAGYLMTVGKGEKERLVPMGESACAAVVLYLSSARIQLGRGGESPFLFLSRLGERMTRQAFWNIIKKRSRQAGILKGISP
HTLRHSFATHLLENGADLRSVQAMLGHADLSTTQIYTHVTRERLKRLHEQFHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-50 46
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-50 46