Gene Information

Name : GSU1162 (GSU1162)
Accession : NP_952215.1
Strain : Geobacter sulfurreducens PCA
Genome accession: NC_002939
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1266399 - 1267094 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCGAAACGCGGGAACCCATCGTCGCCATCCGCAATCTTTCCAAGTCCTACCGCCGGGGGGCGCAACTGATCCCGGT
CCTCCAGGACATTACCCTGGACATTGCCGCCGGGGAGTTCCTGGCGCTCATGGGACCGTCCGGCTCGGGTAAAAGCACGC
TCCTGAACCTGGTTGCAGGGATCGACAAGGCCGACGCGGGGACCATCACCATAGGCGGCGTGGAGATCACGACCCTCTCC
GAGGCCGCACTGGCCTCCTGGCGAGCCGCGCACGTGGGGTTCATCTTCCAATTCTACAACCTGATTCCGGTATTGACGGC
CTTCGAAAACGTGGAGTTGCCGCTGCTCCTGACGGGGCTTTCCCGGCGGCAACGGCGCGAGCATGTGGAAACCGTACTCT
CGCTGGTGGGGCTCTCCGACCGGATGGACCACTACCCCTCCCAGCTTTCGGGGGGACAGCAGCAGCGCGTGGCCGTTGCC
CGGGCCATGGTGACCGATCCGGATATTCTGGTGGCTGACGAACCCACCGGTGACCTGGACCGGGTTTCGGCAGGAGAGGT
GCTGGCCCTCATGGAACGCCTGGTGTCAGGGTTCGGCAAGACCATCATCATGGTTACCCACGATCCCCGGGCTGCAGAGC
AGGCCCACCGGCTCCTCCACCTGGAGAAGGGTGAACTGACCGACGGGGCCGGCTAG

Protein sequence : 
MSETREPIVAIRNLSKSYRRGAQLIPVLQDITLDIAAGEFLALMGPSGSGKSTLLNLVAGIDKADAGTITIGGVEITTLS
EAALASWRAAHVGFIFQFYNLIPVLTAFENVELPLLLTGLSRRQRREHVETVLSLVGLSDRMDHYPSQLSGGQQQRVAVA
RAMVTDPDILVADEPTGDLDRVSAGEVLALMERLVSGFGKTIIMVTHDPRAAEQAHRLLHLEKGELTDGAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 42
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 8e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GSU1162 NP_952215.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-37 47
GSU1162 NP_952215.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-41 44
GSU1162 NP_952215.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-32 41