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Name : DVU0563 (DVU0563) Accession : YP_009785.1 Strain : Desulfovibrio vulgaris Hildenborough Genome accession: NC_002937 Putative virulence/resistance : Unknown Product : ISD1, transposase OrfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 628675 - 629499 bp Length : 825 bp Strand : + Note : identified by similarity to GP:2645861; match to protein family HMM PF00665 DNA sequence : TTGGCGGATTTCATACACAGCGAGCATGGTCTCAGTGAGCGGCGGTCATGCGCTGCGCTGGGGCTTAGCCGGACAGTGTA CCGGTATGAGCTCAAACCGAGAGATGATTCGCTGATCATTGAAGCGCTCCTGGGGCTGGCCGACAGGTATCCTCGTTACG GTTTCGGTAAGCTGTTCGCGGTATTGCGCCGACACGGTTTTCGCTGGAACCATAAACGCGTCTACCGGGTATATTGTCTT TTAAAGATGAACCTTCGGCGCAAAGGCAAGAAGCGCCTGCCCTCGCGAAACCCGCAACCACTGGCGGTTCCGCCATGCGC AAATGTCTGCTGGTCCATTGACTTCATGCATGACGCATTGGCTAGTGGTCAAAGGTTTAGGACGTTCAATGTGTTGGACG ACTTCAGCCGTGAGTGTTTGGCTATCGAAGTTGATACGAATTTGCCAGCGGCACGAGTCTTGCGAGTTTTGGACCGAATA GTGGCTTGGCGCGGGCTGCCTGCCAAATTGAGAATGGATAACGGGCCGGAGCTGATTTCGGTGCTGCTGGCCGACTGGGC CGAGAAGAACGGCGTGGCATTGGAGTTCATCCAGCCAGGCAAGCCCACACAGAATTCGTACATTGAGCGGTTCAACAAGA CCTATCGGGAAGAGGTTCTGGACTTCTATCTGTTCAAATCCCTTACAGAAGTGAAGGAAATTACGGAGAACTGGCTGCGG CAGTACAACGAGGAACGACCCCATGAGTCTCTTGGCGATTTGACCCCGGCAGAGTTCCTCCTGAAAAATTCACCCAAGGA AGTCTCTACTTTTGGATGGCACTAA Protein sequence : MADFIHSEHGLSERRSCAALGLSRTVYRYELKPRDDSLIIEALLGLADRYPRYGFGKLFAVLRRHGFRWNHKRVYRVYCL LKMNLRRKGKKRLPSRNPQPLAVPPCANVCWSIDFMHDALASGQRFRTFNVLDDFSRECLAIEVDTNLPAARVLRVLDRI VAWRGLPAKLRMDNGPELISVLLADWAEKNGVALEFIQPGKPTQNSYIERFNKTYREEVLDFYLFKSLTEVKEITENWLR QYNEERPHESLGDLTPAEFLLKNSPKEVSTFGWH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 5e-86 | 63 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 8e-47 | 41 |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 1e-34 | 41 |
