Gene Information

Name : DVU0562 (DVU0562)
Accession : YP_009784.1
Strain : Desulfovibrio vulgaris Hildenborough
Genome accession: NC_002937
Putative virulence/resistance : Unknown
Product : ISD1, transposase OrfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 628388 - 628654 bp
Length : 267 bp
Strand : +
Note : identified by similarity to GP:2645860; match to protein family HMM PF01527

DNA sequence :
ATGAAGAAATCTCGATTTTCTGAAAGCCAAATCATCAGGATTTTGAAAGAAGCCGATGGCGGTCGCAAGGTCGTTGATAT
CTGCCGTGAAAACGGCGTGAGCCAAGCCACCTACTACCAGTGGAAGGCCAAGTTCGGCGGCATGGAAGCTTCGGATATCC
GCAGGCTCAAGGAACTTGAAGAAGAGAACAGCAAGCTCAAGCGCATGTTCGCCAATCTCAGCCTCGAGAACGAGGCCTTG
AAGGACGTCATTGCAAAAAAGCTTTGA

Protein sequence :
MKKSRFSESQIIRILKEADGGRKVVDICRENGVSQATYYQWKAKFGGMEASDIRRLKELEEENSKLKRMFANLSLENEAL
KDVIAKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 1e-19 63
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 1e-10 51
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 8e-11 51
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 4e-11 51
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 4e-11 51
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 3e-13 48
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 2e-13 48