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Name : DVU0539 (DVU0539) Accession : YP_009762.1 Strain : Desulfovibrio vulgaris Hildenborough Genome accession: NC_002937 Putative virulence/resistance : Virulence Product : sigma-54 dependent DNA-binding response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 610049 - 611452 bp Length : 1404 bp Strand : - Note : identified by similarity to SP:P21712; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM TIGR01199 DNA sequence : ATGCCAACGACATGTGACGAACACATCCTCATCGTCGATGACGAACCCGACTTCGCGCACGGACTGGCAAGACTGGTGAG CAGGGACTTTCCGGCAGCCAGTGTCTCTGTGGCGCTTTCCGGCGCTGAGGCGCTGCACATCATCCAGGGCAGCGGGGTCG CCCTGCTGCTCACCGACCTGCGGATGCCCGACATGGATGGAATGGAACTCATGCAGCAGGCCATGACCGTGGACCCCACG ACTTCGGTCATCCTGCTCACGGCGCACGGTTCCATAGAGACGGCGGTCGCCGCCCTCAAGAACGGCGCATACGACTTCCT CACCAAGCCCGTCCGCCGCGAAGAACTGCAAAGGACCCTCAACAAGGCGCTGGAGCGGATACGCATCCTCAAAGAGAACA AACGGTTGCGTCAAATGATGCAACAAGGCTGCATCGAACGCCAGATGATAGGCGAATCTCCGGTCATGCAACGCCTCAAG GAGACTATCGCGGCCATCGCAGCCACGGACTACTCTGTGCTCATCAGGGGAGAATCAGGGACAGGCAAGGAACTCGTCGC CGACATGCTGCACCGCCTCGGCAGCAGGAGGGAGCGCCCACTAGTCAAAGTGAACTGCCCCTCCATCCCCGACCAGCTTC TGGAAAGTGAACTGTTCGGACACGTCAAAGGGGCATTCACGGGGGCAGACAGGACTCGGCGCGGGCTCTTCATGTCTGCG CAACGGGGAACGCTCCTGCTGGATGAAATCGGGGACATCGGTGAGGCACTCCAGACCAAGCTGCTCCGGGTCTTGCAAGA GCGCGAGATTCGCCCTGTGGGGTCAAGCGCGAGCACCCTCGTGGATGTGCGTATCATCGCCAGCACCAACAGGGCCCTCG AAGAGCGCATCAAGCAGGGACTCTTCCGGGAAGACCTCTTCTACAGGCTCAACGTGCTGACCATCCACACGCCCCCCCTC CGAGAACGGCGCGACGACATCCCACTGCTGGCAGACCACTTCGTCGCGGCGACTTGCCGGGAGCTCTCCAGCCCTGTGAA ACGCATCTCACCCGGCGCACTTGCCTGTCTTGCCGGAAGGGAGTGGCCCGGCAATGTCAGGGAACTACAGAACTACATCC GCAGGCTCGTCGTCTTCTGCCCGGGAGACACCATCGACACCGCCCACCTTCGTCTTGTGGACGGCACGACCTGCCCGACG ACTGCGGAGACGCCATCCCTTGTTCCCTACAAAGAGGCGAAGGGGGCTGTCGTGGAGGATTTCACCCGCCGTTACGTCGA AGGCCTCTTGCGCCAGACGGGAGGCAACATATCCGAGGCGGCGCGACTTTCAGGCATCGAACGCGTGTCACTCCAGAAGA TCCTGCGTCGTCTGGGCACTTCCGGAGACACGTTCAAAGGATAG Protein sequence : MPTTCDEHILIVDDEPDFAHGLARLVSRDFPAASVSVALSGAEALHIIQGSGVALLLTDLRMPDMDGMELMQQAMTVDPT TSVILLTAHGSIETAVAALKNGAYDFLTKPVRREELQRTLNKALERIRILKENKRLRQMMQQGCIERQMIGESPVMQRLK ETIAAIAATDYSVLIRGESGTGKELVADMLHRLGSRRERPLVKVNCPSIPDQLLESELFGHVKGAFTGADRTRRGLFMSA QRGTLLLDEIGDIGEALQTKLLRVLQEREIRPVGSSASTLVDVRIIASTNRALEERIKQGLFREDLFYRLNVLTIHTPPL RERRDDIPLLADHFVAATCRELSSPVKRISPGALACLAGREWPGNVRELQNYIRRLVVFCPGDTIDTAHLRLVDGTTCPT TAETPSLVPYKEAKGAVVEDFTRRYVEGLLRQTGGNISEAARLSGIERVSLQKILRRLGTSGDTFKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 1e-69 | 43 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 1e-69 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DVU0539 | YP_009762.1 | sigma-54 dependent DNA-binding response regulator | BAC0467 | Protein | 3e-78 | 43 |
| DVU0539 | YP_009762.1 | sigma-54 dependent DNA-binding response regulator | BAC0089 | Protein | 8e-86 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DVU0539 | YP_009762.1 | sigma-54 dependent DNA-binding response regulator | VFG1214 | Protein | 4e-67 | 42 |
