Gene Information

Name : DVU3381 (DVU3381)
Accession : YP_012590.1
Strain : Desulfovibrio vulgaris Hildenborough
Genome accession: NC_002937
Putative virulence/resistance : Virulence
Product : transcriptional regulator zraR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 3554350 - 3555729 bp
Length : 1380 bp
Strand : -
Note : identified by similarity to SP:P14375; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199

DNA sequence : 
ATGAGCGACGTGACCGTTCTCATCGTGGATGACGATGTGGCTCACCGCACCATGCTGCGTACCATGCTGCGCGGCTGGGG
CTATGCCACTGACGAGGCCGACGACGGCGAGACCGCCGTCGAGAAGGTGCGCGAAAAGGCCCGCGATGCGGTGCTCATGG
ATGTGCGCATGGCCCGCATGGGCGGTATCGAGGCGTTGCGGCGCATCGTGGAGTACAACCCCGCCGTGCCCGTTCTCATC
ATGACGGCATACTCCTCTGTGGAGACGGCCGTGGAGGCTCTGCGGCTCGGGGCCTACGACTACCTGACCAAGCCGCTGGA
CTTCGATGTGCTGCGCCATACCCTCGAGCGCGCCCTCGACCATACCCGCCTCGTGTCCGAGAACCGTGAGCTGAAGAGCC
GCCTCGACGACGCGGCACGGGCACCGGGCATCATCGGGCGCAGTGCACCCATGCGTGAGCTGGCCGAACTCGTCGCCACC
GTCGCGCCGTCCGAGGCCACGGTGCTCATCACCGGAGAGTCGGGAACAGGCAAGGAACTGGTGGCAAGGTCGCTTCACGA
GGGCAGCCGTCGCAGCGCAAAGCAACTGGTGACGGTGAACTGCGCAGCACTCTCCGAGTCGCTCCTCGAGTCGGAGTTGT
TCGGGCATGAGCGGGGAGCCTTCACCGGGGCCGACAAGCGCCGTGACGGGCGATTCGTGCAGGCCGACGGAGGTACACTC
TTCCTCGACGAGATAGGCGAACTGCCGCTGCTGTTGCAGGCCAAACTGCTGCGGGCGCTGCAACAGGGAGAGATACAGCG
CGTGGGCAGCGACGTTCCGCTGACGGTGGACGTGCGGCTTCTTGCCGCCACCAACCGCGACCTGCGCGAAGAGGTGGCCG
CCGGGCGCTTTCGCGAAGACCTGTTCTATCGCCTCAATGTCATCGGCATCCATATGCCCGCGCTGCGTGAACGGCCCGAT
GACATCCCCCTGCTGGCGGCGCATTTCCTCGACCGTTACGCGGAACGCAACCGCAAGCACCTCAAGGGTTTCACCCCGCA
GGCCATGGACATGCTGCTCAAGCACCCGTGGCCGGGTAACGTGCGTGAACTCGAGAACGCCGTGGAGAGGGCTGTCATCA
TGGCCACGGGTGACTGGGTCGGCGAACGTGAACTGCCCATGTCCCTGCGCGGGGCGGGGGGCGCCGACCCAGCCGTCGCC
GATGCCGCACTGCCCACCGGTCAGGACCCCTACGCCGGTCTCTCACTGGAAGACCTCGAGCGTCGCGCCATCGTCGCCAC
CCTGCGCGAGACGGGTGACAACAAGAGTGAAGCCGCAAGGCGTCTCGGCATCACCCGTGCCACACTGCACAACAAACTCA
AGAAGTACGACCTCGAATGA

Protein sequence : 
MSDVTVLIVDDDVAHRTMLRTMLRGWGYATDEADDGETAVEKVREKARDAVLMDVRMARMGGIEALRRIVEYNPAVPVLI
MTAYSSVETAVEALRLGAYDYLTKPLDFDVLRHTLERALDHTRLVSENRELKSRLDDAARAPGIIGRSAPMRELAELVAT
VAPSEATVLITGESGTGKELVARSLHEGSRRSAKQLVTVNCAALSESLLESELFGHERGAFTGADKRRDGRFVQADGGTL
FLDEIGELPLLLQAKLLRALQQGEIQRVGSDVPLTVDVRLLAATNRDLREEVAAGRFREDLFYRLNVIGIHMPALRERPD
DIPLLAAHFLDRYAERNRKHLKGFTPQAMDMLLKHPWPGNVRELENAVERAVIMATGDWVGERELPMSLRGAGGADPAVA
DAALPTGQDPYAGLSLEDLERRAIVATLRETGDNKSEAARRLGITRATLHNKLKKYDLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
norR ABD94719.1 putative nitric oxide reductase transcriptional regulator Not tested ExoU island B Protein 2e-43 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DVU3381 YP_012590.1 transcriptional regulator zraR BAC0467 Protein 5e-117 60
DVU3381 YP_012590.1 transcriptional regulator zraR BAC0089 Protein 5e-81 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DVU3381 YP_012590.1 transcriptional regulator zraR VFG0116 Protein 4e-56 43
DVU3381 YP_012590.1 transcriptional regulator zraR VFG1249 Protein 3e-57 43
DVU3381 YP_012590.1 transcriptional regulator zraR VFG1214 Protein 7e-60 41