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Name : kdpB (DVU3338) Accession : YP_012546.1 Strain : Desulfovibrio vulgaris Hildenborough Genome accession: NC_002937 Putative virulence/resistance : Unknown Product : K+-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 3512169 - 3514205 bp Length : 2037 bp Strand : - Note : identified by similarity to GP:2772548; match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01497 DNA sequence : ATGCACACCGCAAACAACACTTCGACACCTTCTGCCCTCTACCGGCGCGCATGCATCGACGCCATCGGCAAGCTACGCCC GAATCATATGGTACGTAATCCGGTCATGTTCACCGTTGCCGTCGGCGCCCTGCTAACCACTGTCGCCTTCGTCCGCGACA TGATGGCCGGTTCCGGCGTCCTGTTCAGCGCGCAGATTACGTTATGGCTATGGGCTACCGTCCTGTTCGCCAACTTCGCC GAGGCACTGGCAGAAGGGCGAGGCAAGGCACAGGCAGACAGCCTGCGCCATGCCCGCCGTGACACCCCGGCGCATCAGGT GCAACCCGACGGCACGGTGCAGGTGGTATCTGCCTCGACCCTGCAACGCGGCGATGAGGTCGTCGTCGCAGCGGGCATGG TCATTCCCGCCGACGGCACCGTGATCGCCGGGGCTGCCGCCGTGGACGAGTCGGCCGTCACCGGAGAGTCGGCACCTGTC ATCCGTGAGTCGGGCGGCGACAGAAGCGCCGTCACCGGCGGTACGACGGTCATCTCCGACACCCTGCGCATCAAGGTCAC ACAGGAACCGGGAAAGTCGTTCCTCGACCGGATGATAGCCCTTGTCGAAGGGGCCGAGCGTAAGAAGACGCCCAACGAGA TAGCCCTGAACATCCTTCTTGCGGGTCTCACGCTCATCTTCATCCTCGCCACGGTGACCCTCAAGCCCATGGCCCTGTTC CACGGTGCGCGGGTGGACGTGGTGGTTCTCGCCGCCTTGCTGGTGTGTCTCATCCCCACCACCATCGGAGGGCTGCTGGC GGCGATCGGCATCGCCGGCATGGACAGGCTGCTGCGTCGCAACGTGCTGGCGATGTCCGGTCGTGCCGTCGAGGCCGCAG GAGACGTGGACGTGCTGTTGCTGGACAAGACGGGGACGATAACCCTCGGCAACCGCATGGCCACCGCATTCATCCCCATG CCGGGCATCTCTCCCGAACACCTGTGCAAGGCCGCCCTGCTTGCATCCCACGGTGACGAGACTCCTGAAGGTCGTTCCAT CGTCACCCTTGCCCGGACTGAACTCGGCACGGGTCTCCCCGCGATGCCCGACAACGCCACGTTCATCCCCTTCCGGGCGG AGACCCGCATGAGCGGCAGCGACTACACCGGGACGTCCATCCGCAAGGGCGCAGCCGATGCCGTGAAAGCGTGGTTGCGG GGACTGGGGAGGCACATGGACGAGACGACACTCGACACCGTGGTGCTGGATATCGCGGCACAAGGCGGGACGCCGCTCGT CGTCGCATCCGACACCGAGGGGGTGCTGGGGGTCATCCACCTGAAGGACATGGTCAAGCCGGGCATAAGCGACAGGTTCG AACGCATCCGCGCCATGGGCATCCGCACCGTCATGGTCACCGGCGACAACAGGCTCACCGCCCGCTCCATCGCGGCTGAA GCCGGTGTGGACGACTTTCTCGCGGAGGCGAAACCGGAGGACAAGCTCGACCTCATCGTGCGCCTGCAAAAGGAAGGAAG ACTGGTCGCCATGTCGGGTGACGGAACGAACGACGCCCCGGCACTGGCACAGTCGGACGTGGGGTTGGTCATGAACACCG GCACTCAGGCTGCGCGTGAGGCCGGGAACATGATCGACCTCGATTCCGACCCCACCAAGCTCATCGAGATCGTCGAAATC GGCAAGCAGCTGCTCATCACGCGGGGGGCGCTCACGACCTTCAGCGTCGCCAACGACATCGCGAAGTACTTCGCCATCAT CCCGGCCATCTTCGTGGCTTCGCTGCCACAGCTTGCGGCCCTGAATGTCATGGGACTCTCCAGCCCCCGGAGTGCCGTCC TCTCTGCGGTCATCTTCAATGCGCTGATCATCGTCGCGCTCATCCCCCTCGCCTTGCGTGGCGCGCACTACCGCCCGCGT TCCACGGGCGCCACCCTGCGGCGCAATCTGCTCGTGTACGGGCTGGGCGGGCTTGTCGCCCCGTTCGTGGGCATCAAGGC CATCGACATCCTTCTTACCGCCCTCGGCCTCGCATAG Protein sequence : MHTANNTSTPSALYRRACIDAIGKLRPNHMVRNPVMFTVAVGALLTTVAFVRDMMAGSGVLFSAQITLWLWATVLFANFA EALAEGRGKAQADSLRHARRDTPAHQVQPDGTVQVVSASTLQRGDEVVVAAGMVIPADGTVIAGAAAVDESAVTGESAPV IRESGGDRSAVTGGTTVISDTLRIKVTQEPGKSFLDRMIALVEGAERKKTPNEIALNILLAGLTLIFILATVTLKPMALF HGARVDVVVLAALLVCLIPTTIGGLLAAIGIAGMDRLLRRNVLAMSGRAVEAAGDVDVLLLDKTGTITLGNRMATAFIPM PGISPEHLCKAALLASHGDETPEGRSIVTLARTELGTGLPAMPDNATFIPFRAETRMSGSDYTGTSIRKGAADAVKAWLR GLGRHMDETTLDTVVLDIAAQGGTPLVVASDTEGVLGVIHLKDMVKPGISDRFERIRAMGIRTVMVTGDNRLTARSIAAE AGVDDFLAEAKPEDKLDLIVRLQKEGRLVAMSGDGTNDAPALAQSDVGLVMNTGTQAAREAGNMIDLDSDPTKLIEIVEI GKQLLITRGALTTFSVANDIAKYFAIIPAIFVASLPQLAALNVMGLSSPRSAVLSAVIFNALIIVALIPLALRGAHYRPR STGATLRRNLLVYGLGGLVAPFVGIKAIDILLTALGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 9e-159 | 59 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-158 | 59 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 7e-146 | 57 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-145 | 57 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-145 | 57 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-145 | 57 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-145 | 57 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-146 | 57 |
