Gene Information

Name : DVU2976 (DVU2976)
Accession : YP_012187.1
Strain : Desulfovibrio vulgaris Hildenborough
Genome accession: NC_002937
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 3084007 - 3085119 bp
Length : 1113 bp
Strand : -
Note : identified by similarity to OMNI:NT01MC0831; match to protein family HMM PF04463

DNA sequence :
ATGAGTTCAAACCGTTGTGACGACTGTCACCCCGCTGGCATCGACGACGCGAACCGTCAGCCCCGTCTCGAGACCGCCGC
GAAGGGAGGCGGCGAGCCTGCCCCCTCCACCGCGAATCTGCCCGATGCGGCGCATCTGCCCGGCGGGCGCATCCGCATCG
GGATAAGCTCGTGCCTGCTGGGCAATCCGGTGCGGTTCGATGGCGGACACAAGTTCGACCCGTGGGTGGTCAACGTGCTT
GGAGCCTACCTCGATTTCGTGCCCGTCTGTCCCGAGGTGGAGTGCGGCATGGGTATCCCGCGCGAGGCGCTGCGCCTCGT
GGGCGACCCTTCCGCGCCGCGCCTTGTCACCGTGAAGCATGGCGAGGACTGGACGGACAGGATGAGGGCGTGGGCGGAGC
GCCGCGTGGCCGAACTCGAAGGCGAGGGGCTGTGCGGCTACATCTTCAAGCGCGCGTCACCGTCCAGCGGCATGGAGCGC
GTGAAGGTCTACCCCGAATTCGACCCCGCCACGGGCAAGAGCGGCGGCGTGCCTGTGCAGAAGGGCGTGGGCATGTTCGC
GCGTGCTTTCATCGAGCGTTTCCCGCTGCTGCCGGTGGAGGAGGAGGGCAGGCTCAACGACCCCGACCTGCGCGAGAACT
TCATCGAACGTCTCTTCGTCATGCGTCGCTGGCGTCAGCTTCTCGACGACGGACTCGACACGGGCGGGCTTGTGGCCTTC
CATACCCGGCACAAACTCCTCATGCTGGCCCATTCGCCGCAGCACTATCGCACCATGGGAAAGCTGGTGGCACAGGCGGC
GACCTATCCCCGTGACGAACTGCGCGAGGCTTACCAGCGCCTGCTCATGGAAGGTCTGCGGCTTCGCGCGACCCCCGCCA
AGCACGTCAACGTGCTGCAGCACATCATGGGGTATTTCCGCAAGCAACTGACCCCCGACGAGAAGCAGGAGATGCTGGAA
CAGATAGACCTCTATCGCCGCGCCCTCGTGCCGCTGGTGGTTCCCGTGACACTGCTCAATCACTATGTCCGCAAGTATGG
CGAGAAGTATCTGGCAGGCCAGTTCTACCTCAACCCGCATCCGGTCGAACTCAAGCTGCGCAACCATGTGTGA

Protein sequence :
MSSNRCDDCHPAGIDDANRQPRLETAAKGGGEPAPSTANLPDAAHLPGGRIRIGISSCLLGNPVRFDGGHKFDPWVVNVL
GAYLDFVPVCPEVECGMGIPREALRLVGDPSAPRLVTVKHGEDWTDRMRAWAERRVAELEGEGLCGYIFKRASPSSGMER
VKVYPEFDPATGKSGGVPVQKGVGMFARAFIERFPLLPVEEEGRLNDPDLRENFIERLFVMRRWRQLLDDGLDTGGLVAF
HTRHKLLMLAHSPQHYRTMGKLVAQAATYPRDELREAYQRLLMEGLRLRATPAKHVNVLQHIMGYFRKQLTPDEKQEMLE
QIDLYRRALVPLVVPVTLLNHYVRKYGEKYLAGQFYLNPHPVELKLRNHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 4e-44 41
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 4e-44 41
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-44 41
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 3e-44 41
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 4e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DVU2976 YP_012187.1 hypothetical protein VFG0490 Protein 2e-44 41