|
Name : nusG (DVU2923) Accession : YP_012135.1 Strain : Desulfovibrio vulgaris Hildenborough Genome accession: NC_002937 Putative virulence/resistance : Unknown Product : transcription antitermination protein NusG Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 3021239 - 3021790 bp Length : 552 bp Strand : + Note : identified by similarity to SP:P16921; match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922 DNA sequence : ATGACCGAGACGACTACCGCCTCAAAGGCCCGTTGGTACATCGTACATACCTATTCGGGCTTCGAGAACAGGGTTGAACA GACCATCCGCGAAATGATCCGCACCGGGCAATCCCAGGACGAGATCGTCGAGGTGGTCGTTCCTACGGAAAAGGTCATCG AACTCGTCAAGGGCGAGAAGAGGACCTCCACCCGCAAGTTCTACCCCGGGTATGTGATGGTCAAGATGTTCATGACGGAT TTCTCGTGGCATCTCGTCCAGTCCATTCCCAAGGTTACGGGGTTTGTCGGCGGCAAGAACCGCCCCACACCCATGCGCGA CAGCGAAGCCGAGCGCATCCTTGCCATGATGGAATCGCGTCAGGAGCAGCCGCGGCCGAAGTTCAACTTCGATCGTGGGG ATGAAGTACGGGTCATCGACGGGCCCTTCGGCGGCTTCAACGGAGTCGTTGAAGACGTCAACTATGACAAGGGCAAACTC AGGGTCTCGGTTTCGATCTTCGGTCGCCAGACCCCTGTCGAGCTGGACTTCGTTCAGGTTTCCAAGGGATAG Protein sequence : MTETTTASKARWYIVHTYSGFENRVEQTIREMIRTGQSQDEIVEVVVPTEKVIELVKGEKRTSTRKFYPGYVMVKMFMTD FSWHLVQSIPKVTGFVGGKNRPTPMRDSEAERILAMMESRQEQPRPKFNFDRGDEVRVIDGPFGGFNGVVEDVNYDKGKL RVSVSIFGRQTPVELDFVQVSKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 1e-43 | 50 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 1e-43 | 50 |
