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Name : umuC (DVU2906) Accession : YP_012118.1 Strain : Desulfovibrio vulgaris Hildenborough Genome accession: NC_002937 Putative virulence/resistance : Unknown Product : umuC protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 3007579 - 3008982 bp Length : 1404 bp Strand : - Note : identified by similarity to SP:P04152; match to protein family HMM PF00817 DNA sequence : GTGCATGGGCCGCCTGAATCACAAGAGCCATGCGGAACCTTCGGGCCAGACGAGACCACAGGGGCAACCTCGACGGCCGC ATCACGCGGGGAGGCCCGACGCCTGCCGCGGGGGGGCGTCCTGTGGGCGCTGGTGGACTGCAACAACTTCTACGCCTCGT GCGAACGGCTTTTCAGGCCCGACCTCAAGGGGCGTCCGGTCGTGGTGCTTTCCAACAACGACGGCTGTGTCATCGCGCGT TCCGCCGAAGCCAAGGCACTCGGCGTGCCCATGGGGGCACCGGAGTTCAAGGTGCGCGACATGCTGCGTGCCCACGACGT GGCTGTGTTCTCGTCCAATTACGCCCTGTACGGCGACCTCTCGCAACGGGTCATGCGCACACTGGCGACGGTGGTGCCCC GGGTCGAGGTCTATTCCATCGACGAGGCGTTCATCCCGTTGCCTGCGGCACTTGCCGCCGACCCCGTAGCTGTGGGGCGC ACCCTGCGGCAGCGCGTGGCGCAATGGGTGGGCATTCCCGTGTCGGTGGGCGTCGGCCCCACGCGGACCCTCGCCAAGCT TGCCAACAGGCTTTCCAAGCAGGACTCCGCGTATGGGAATGTCTTCGACCTGACCCCGGAGACGGTGGACATGGACAGGG TACTCGCCAGCGTGGATGTGGGCGATGTGTGGGGCGTGGGGCGCCGGAGTGCGGAGATGCTGCGGGGGCGTGGCATTCTC ACCGCGCGGGCGCTGCGCGACGCAGACCCCCTGTGGGTGCGGCAGCGCATGACCGTCACGGGCTGGCGCACGCAGCAGGA GTTGCGGGGAATGCCGTGCCTCACGGATGACGACCTGCCCGTGCCGCGTCGTTCCATCCGCTCATCCCGTTCGTTCGGTC AGATGGTGCGCACCTTGGAGCCCCTGCGGGAGGCGGTCGCCACGTTCACCGCACGGGCGGTGGCCAAGGCGCGCGCCGAA GGGCTTGTGGCGTCGTGCATCGAGGTGCATATCCGCACGCCGCGGCACACCGAACGACCACGTTACGACGAGACGACGAC CATCACCCTGCCTTGCCCCACGGCGGACACGGGCCTGTGCATACGACACGCCCTCACGGGGCTGGAGCGCATCTTCCGTG AGGGCTATCTCTACGCCAAGGCGGGGGTCACGCTGTTCGGACTCGAACCGGCTGCGGGGCGGCAGGGGAGCCTTCTCGAC CTCCTCGACGGTTCGCACGAGCACAAGGCGCGACGCGAACGACTCATGGCCGCGCTGGATGCCGTCAACCTACGGCACGG GCGCGGGAGTATCCGCCACGGTGCGGAAGGCGACCCCGGTGCCGCGTGGCATATGAGCCAGAAGTACCGTTCGCCGCGCT ACACCACGGCATGGGAGGAACTGCCCGAAGTGCTCTGCCGTTGA Protein sequence : MHGPPESQEPCGTFGPDETTGATSTAASRGEARRLPRGGVLWALVDCNNFYASCERLFRPDLKGRPVVVLSNNDGCVIAR SAEAKALGVPMGAPEFKVRDMLRAHDVAVFSSNYALYGDLSQRVMRTLATVVPRVEVYSIDEAFIPLPAALAADPVAVGR TLRQRVAQWVGIPVSVGVGPTRTLAKLANRLSKQDSAYGNVFDLTPETVDMDRVLASVDVGDVWGVGRRSAEMLRGRGIL TARALRDADPLWVRQRMTVTGWRTQQELRGMPCLTDDDLPVPRRSIRSSRSFGQMVRTLEPLREAVATFTARAVAKARAE GLVASCIEVHIRTPRHTERPRYDETTTITLPCPTADTGLCIRHALTGLERIFREGYLYAKAGVTLFGLEPAAGRQGSLLD LLDGSHEHKARRERLMAALDAVNLRHGRGSIRHGAEGDPGAAWHMSQKYRSPRYTTAWEELPEVLCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 8e-62 | 43 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 3e-57 | 42 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 3e-57 | 42 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 3e-46 | 42 |
