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Name : DVU2246 (DVU2246) Accession : YP_011459.1 Strain : Desulfovibrio vulgaris Hildenborough Genome accession: NC_002937 Putative virulence/resistance : Unknown Product : S1 RNA-binding domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 2341713 - 2343884 bp Length : 2172 bp Strand : + Note : identified by match to protein family HMM PF00575 DNA sequence : GTGACTGAAACGATTCCACACGACTCTGTCGCACATCGCCTCGCCGCCGACTTGGGCATCACGACCGCACAGGCAAGTGC GGCACTCAAGCTTTTCGACGAGGGGGGCACCATCCCCTTCGTGGCCCGCTATCGCAAGGAGGCCACTGGCGGCCTCGACG AGGTGGCCCTCACCGCCTTGCGTGACGGCTGCGAACGGCTTCGTACGCTGGACAAGCGACGTGACGCCATCATCGCCTCC ATGACGGAGCGCGAACAGCTTACCCCCGACCTCGCCAAGGCCCTCCATGCGGCGACCACTCTCACCGCGCTGGAAGACAT CTACCTGCCCTTCCGCCCCAAACGGGTGACAAGGGCCGCCAAGGCGCGTGAACGTGGCCTCGCCCCCCTTGCTGAACGGC TGCTCGAACAACGCGGCGCACAGGCGGGGCAGCTTGCCGCCCCGTTCGTCGACGAGGCCAAGGGGGTTCCCGACACGGCA GCCGCCCTTGCAGGGGCACGTGACATCATCGCCGAGACAGTGAGCGAAGACAGGGCCACACGCGCCACCCTGCGCGACAT CTTCGTCCGCCGTGCGACGCTGCGTTCGAAGGTCGCACGTGGCAAGGAGGAACAGGCCGCAACCTATCGCGACCACTTCG ACCGCAGCGAACATGCAGCCGCCGCCCCGGCGCACAGACTGCTCGCCATGTTCCGTGGCGAACGCGAAGAGCTTCTCGAC GTGCGGGTGCGGCCCGATGACGACATTGCCGTGGGGGCCCTTCACCGTCGCTGGCTGAAAGGGCGTGCATCTTCAGCCGG GACGGATGCGGCTGAAGTGGCCACGGCCCTGACCGACGCATGGAATCGTCTTCTGGCCCCGTCACTCGAGAACGAGTTCA GAACCGCCCTGCGCGAACGGGCCGAAGCGGAGGCCATAGCCGTCTTCGCCGCCAACCTTCGGGAATTGCTACTGGCCCCG CCGATGGGGCCACGACGCACACTCGCACTCGACCCCGGCTGGCGCACCGGGGCCAAGCTTGTATGCCTTGACGCGCAAGG GGCCCTGCTGCACCACGAGGTCATCCACCCCCTCACCGGTGGAGACCGGGCGACCCGCGCCGCCGCCACCCTGCGTGAAC TTTGCACACGGCACGGCATCGAAGCGGTGGCCGTCGGCAACGGTACAGCGGGGCGCGAGACCGAAGCCTTCGTCAAGTCG GCCGGGCTTCCACCTCATGTGACGGTGGCCCTCGTGGATGAGCGCGGGGCCTCGGTCTACTCCGCCTCCGAGGTCGCCCG CGCAGAATTCCCCGACCACGACGTCACCGTGCGCGGCGCCATATCCATCGGGCGCAGGCTCATGGACCCGCTGGCCGAAC TCGTCAAGGTCGACCCCCGCTCTCTGGGCGTGGGCCAGTACCAGCATGATGTCGACCAGAACGCCCTGCGTCGCGCCCTC GAAGAGGTCGTGGCGTCGTGCGTCAACGCCGTGGGAGTGGATGTCAACACCGCCAGCCCCGAATTGCTCGCCTACGTCTC GGGCATCGGCCCCGCGCTGGCGAAAGGCATCGTGGCATTGCGTGCCGTCAACGGTCCGTTCCGTACACGGCGCGACCTTC TCAAGGTGCCGCGCCTCGGCCCCAAGGCCTTCGAACAGGCTGCCGGCTTCCTGCGTGTGCATGGCGGCCCCGAACCTCTC GATGCAAGTGCCGTCCACCCTGAAAGCTATGCCGTCGTGCGACGCATGGCAGAGGATACCGGGTGCAGCGTGCCCGACCT CATGCGCGATGCCACCCGGCGCGAGGCCCTGCGGCTGGAACGCTATGTGGACGACCGGGTAGGTCTGCCCACGTTGCGCG ACATCATGTCGGAACTTGCGCGACCGGGCCGTGACCCGCGTCCGGCTTTCGAGGTCTTCGCCTTTGCCGAAGGTGTGAAC AAGGTCGATGATGTCCAGCCCGGCATGGAGCTTCCCGGCATCGTCACCAACGTCACCAAGTTCGGTGCCTTCGTTGACAT CGGCGTCCACCGTGACGGTCTCGTGCATGTGAGCCAGCTGGCCGACCGTTTCGTACGCGACCCTGCCGAGGTCGTGGCGC CGGGACGCAAGGTGCGGGTACGGGTGCTCGATGTGGACAGGCAGCGTGAACGCATCAACCTCACGCTCAAAGGGGTTCCG CAGCAGGATTGA Protein sequence : MTETIPHDSVAHRLAADLGITTAQASAALKLFDEGGTIPFVARYRKEATGGLDEVALTALRDGCERLRTLDKRRDAIIAS MTEREQLTPDLAKALHAATTLTALEDIYLPFRPKRVTRAAKARERGLAPLAERLLEQRGAQAGQLAAPFVDEAKGVPDTA AALAGARDIIAETVSEDRATRATLRDIFVRRATLRSKVARGKEEQAATYRDHFDRSEHAAAAPAHRLLAMFRGEREELLD VRVRPDDDIAVGALHRRWLKGRASSAGTDAAEVATALTDAWNRLLAPSLENEFRTALRERAEAEAIAVFAANLRELLLAP PMGPRRTLALDPGWRTGAKLVCLDAQGALLHHEVIHPLTGGDRATRAAATLRELCTRHGIEAVAVGNGTAGRETEAFVKS AGLPPHVTVALVDERGASVYSASEVARAEFPDHDVTVRGAISIGRRLMDPLAELVKVDPRSLGVGQYQHDVDQNALRRAL EEVVASCVNAVGVDVNTASPELLAYVSGIGPALAKGIVALRAVNGPFRTRRDLLKVPRLGPKAFEQAAGFLRVHGGPEPL DASAVHPESYAVVRRMAEDTGCSVPDLMRDATRREALRLERYVDDRVGLPTLRDIMSELARPGRDPRPAFEVFAFAEGVN KVDDVQPGMELPGIVTNVTKFGAFVDIGVHRDGLVHVSQLADRFVRDPAEVVAPGRKVRVRVLDVDRQRERINLTLKGVP QQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 1e-124 | 47 |
