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Name : DVU2178 (DVU2178) Accession : YP_011391.1 Strain : Desulfovibrio vulgaris Hildenborough Genome accession: NC_002937 Putative virulence/resistance : Unknown Product : ISDvu2, transposase OrfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2277993 - 2278835 bp Length : 843 bp Strand : - Note : identified by match to protein family HMM PF00665 DNA sequence : ATGAAGCGTGTAGCGGACTCCCTGCAAGTCTCCCGTTCGCGTTTGGCAGAGCGGCTTGACGGTCCACATCGTACCAGAAA GCCTCGTTACGTGAAGGCGCAGGATGAGGAATTGCTTCGTCTCATCCGTGCCATTCTTGATGAGCGGCAAACCTACGGCT ATCGGCGGATACAGGCGTGCCTCAATGCCCATTTGAGAGCTACAGGGCAATCTGAAGTCAATCACAAGCGCGTTTACCGC ATCATGCGGATGAATGGCCTGTTGCTCACCCGTCATAACGGCAAACGTCCAGACAAGGCGCACGAAGGCAAGATTGTTAC TCTGCACCGCAATACACGATGGTGTTCTGATGGGTTTGAGATCCCATGCGATAACCGGGAGGTCGTGCGTGTCGCGTTCG TCCTCGATTCGTGCGACCGGGAAGTCATCAGCTACGTTGCGACGACCAGGGGCATCTCAGGCTCTATGGTCCGCGATCTG ATGCTGGAAAGCGTGGAGCGCCGATTCGGCAATGCGCACACGTCCCATACAGTGGAATGGCTTTCAGACAATGGATCTTG TTATACTGCGAAGGAAACAGTGGAGTTTGCCTCGTGGCTAGGCCTGCGAAGCTGCTTTACCCCGGTGCGCAGTCCAGAGA GCAATGGCATGGCAGAGGCATTCGTGAAGACATTCAAGCGTGATTACGTTGACTGCAACATCTGTCCCGACGCACCGAGC GTTCTGAAGCGCCTTTCCGAGTGGTTCGAAGACTACAACGAAAATGCTCCACACAAGGGATTACGGATGCGCTCGCCAAG ACAATTCATCCGACTGTCAGCAACCGCAGGGTGTCCGGTTTAG Protein sequence : MKRVADSLQVSRSRLAERLDGPHRTRKPRYVKAQDEELLRLIRAILDERQTYGYRRIQACLNAHLRATGQSEVNHKRVYR IMRMNGLLLTRHNGKRPDKAHEGKIVTLHRNTRWCSDGFEIPCDNREVVRVAFVLDSCDREVISYVATTRGISGSMVRDL MLESVERRFGNAHTSHTVEWLSDNGSCYTAKETVEFASWLGLRSCFTPVRSPESNGMAEAFVKTFKRDYVDCNICPDAPS VLKRLSEWFEDYNENAPHKGLRMRSPRQFIRLSATAGCPV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL67379.1 | transposase-like protein | Not tested | PAI II CFT073 | Protein | 6e-51 | 51 |
| SF2985 | NP_708759.1 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 1e-50 | 51 |
| unnamed | CAC39284.1 | hypothetical protein | Not tested | LPA | Protein | 4e-52 | 51 |
| tnpF | AAD44739.1 | TnpF | Not tested | SHI-2 | Protein | 2e-50 | 51 |
| ECO111_3773 | YP_003236109.1 | putative IS2 transposase InsAB | Not tested | LEE | Protein | 3e-51 | 50 |
| S4061 | NP_839230.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 3e-51 | 50 |
| insD | YP_002414033.1 | insertion element IS2 transposase InsD | Not tested | Not named | Protein | 1e-51 | 50 |
| SF3721 | NP_709460.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 6e-51 | 49 |
| S3189 | NP_838472.2 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 7e-50 | 49 |
| S4050 | NP_839218.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 6e-51 | 49 |
| SF3708 | NP_709447.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 6e-51 | 49 |
| aec49 | AAW51732.1 | Aec49 | Not tested | AGI-3 | Protein | 9e-50 | 49 |
| unnamed | CAC39283.1 | hypothetical protein | Not tested | LPA | Protein | 4e-51 | 45 |
| c5197 | NP_757045.1 | transposase insD | Not tested | PAI II CFT073 | Protein | 3e-38 | 44 |
| insD | YP_854263.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 4e-39 | 44 |
| insD | AAZ04432.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 3e-39 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DVU2178 | YP_011391.1 | ISDvu2, transposase OrfB | VFG0649 | Protein | 5e-51 | 51 |
| DVU2178 | YP_011391.1 | ISDvu2, transposase OrfB | VFG1732 | Protein | 6e-52 | 50 |
| DVU2178 | YP_011391.1 | ISDvu2, transposase OrfB | VFG0608 | Protein | 2e-51 | 49 |
| DVU2178 | YP_011391.1 | ISDvu2, transposase OrfB | VFG0621 | Protein | 2e-51 | 49 |
