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Name : DVU2010 (DVU2010) Accession : YP_011226.1 Strain : Desulfovibrio vulgaris Hildenborough Genome accession: NC_002937 Putative virulence/resistance : Unknown Product : ISD1, transposase OrfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2089119 - 2089943 bp Length : 825 bp Strand : - Note : identified by match to protein family HMM PF00665 DNA sequence : TTGGCGGATTTCATACACAGCGAGCATGGCCTCAGTGAGCGGCGGTCATGCGCTGCGCTGGGGCTTAGCCGGACAGTGTA CCGGTATGAGCTCAAACCGAGAGATGATTCGCCGATCATTGAAGCGCTCCTGGGGCTGGCCGACAGGTATCCTCGTTACG GTTTCGGCAAGCTGTTCGCGGTATTGCGCCGACACGGTTTTCGCTGGAACCATAAACGCGTCTACCGGGTATATTGTCTT TTAAAGATGAACCTTCGGCGCAAAGGCAAGAAGCGCCTGCCCTCGCGAAACCCGCAACCACTGGCGGTTCCGCCATGCGC AAATGTCTGCTGGTCCATTGACTTCATGCATGACGCATTGGCTAGTGGTCAAAGGTTCAGGACGTTCAATGTGTTGGACG ACTTCAGCCGTGAGTGTTTGGCTATCGAAGTTGATACGAATTTGCCAGCGGCACGAGTCTTGCGAGTTTTGGACCGAATA GTGGCTTGGCGCGGGCTGCCTGCCAAATTGAGAATGGATAACGGGCCGGAGCTGATTTCGGTGCTGCTGGCCGACTGGGC CGAGAAAAACGGCGTGGCATTGGAGTTCATCCAGCCAGGCAAGCCCACACAGAATTCGTACATTGAGCGGTTCAACAAGA CCTATCGGGAAGAGGTTCTGGACTTCTATCTGTTCAAATCCCTTACAGAAGTGAAGGAAATTACGGAGAACTGGCTGCGG CAGTACAACGAGGAACGACCCCATGAGTCTCTTGGCGATTTGACCCCGGCAGAGTTCCTCCTGAAAAATTCACCCAAGGA AGTCTCTACTTTTGGATGGCACTAA Protein sequence : MADFIHSEHGLSERRSCAALGLSRTVYRYELKPRDDSPIIEALLGLADRYPRYGFGKLFAVLRRHGFRWNHKRVYRVYCL LKMNLRRKGKKRLPSRNPQPLAVPPCANVCWSIDFMHDALASGQRFRTFNVLDDFSRECLAIEVDTNLPAARVLRVLDRI VAWRGLPAKLRMDNGPELISVLLADWAEKNGVALEFIQPGKPTQNSYIERFNKTYREEVLDFYLFKSLTEVKEITENWLR QYNEERPHESLGDLTPAEFLLKNSPKEVSTFGWH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 5e-87 | 64 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 5e-47 | 41 |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 7e-35 | 41 |
