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Name : DVU0160 (DVU0160) Accession : YP_009385.1 Strain : Desulfovibrio vulgaris Hildenborough Genome accession: NC_002937 Putative virulence/resistance : Virulence Product : carbohydrate isomerase KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 197147 - 198142 bp Length : 996 bp Strand : - Note : identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 DNA sequence : ATGACAGACGACCAGATACATCAGACCGACTGGCTGCAACGCGGCCGCGACGTTCTCGATATCGAAGCGGAGGGCATCCG TGCCGTACGCGACAGGCTTGGCCCCTCGTTCGAATCCGCGCTGGCCCTGCTGGCAGGATGCCGCGGCCGTGTCGTTGTGA CAGGCCTCGGCAAGTCGGGGCTGGTGGGCCGCAAGCTGGCCGCCACCTTCTCGTCCACGGGCAGCCCCGCCTTCTTCCTG CACCCCGTAGAGGGCGCACATGGCGACATGGGCAGCCTCAAGGCCGACGACGTGGTCATCGCCATCTCCAACTCCGGCGA GACGGATGAACTCAACGCCATCCTGCCCAGCCTGCGCGCCATCGGCACGCCCATCATCGCCCTGACCGGCCGCGCCGACT CGTCACTGGGACGCGGTGCCGACATCGTGCTCGACTGCGGCGTACCGCGTGAAGCGTGCCCGCTGGGGCTTGCCCCTACG GCGTCCACCACGGCGGTACTCGCCCTTGGCGACGCACTGGCGGTCTGCCTCATCGACTGGAAGTCCTTCACCGAGAACGA CTTCCTGCGCTACCACCCCGGCGGTTCACTGGGCCAGCGGCTGCGGCTGCGCGTGGCTGAACTCATGCACACCGAGGGCA TTCCGGTGGTCAACGAAGAGGCCGTGTGCGAAGAGGCCGTTCTCGCCCTCGACAAGGGCGGCTTCGGGGCCGTGGCCCTC ACGGACGGCGGTGGGAGGCTGACCGGCATCCTCACCGACGGTGACGTACGCCGTGCCGTCCTTCGCGGCACCTACGGCCC GCGCGTGGGAGTCACCCACATCATGACGCGCAACCCCCGTTTCGCACGGCAGACCCAGTCGGTGGCCGAACTCATCGACA TCATGGAACAGAAGGCCATCACCGTGCTTCCCATCACCGACGACGACCACCGGCTTGTGGGCCTCGTGCACCTGCACGAC CTGCTGGGCAAGGGCGGCGTCACGTTCGCGGGCTAG Protein sequence : MTDDQIHQTDWLQRGRDVLDIEAEGIRAVRDRLGPSFESALALLAGCRGRVVVTGLGKSGLVGRKLAATFSSTGSPAFFL HPVEGAHGDMGSLKADDVVIAISNSGETDELNAILPSLRAIGTPIIALTGRADSSLGRGADIVLDCGVPREACPLGLAPT ASTTAVLALGDALAVCLIDWKSFTENDFLRYHPGGSLGQRLRLRVAELMHTEGIPVVNEEAVCEEAVLALDKGGFGAVAL TDGGGRLTGILTDGDVRRAVLRGTYGPRVGVTHIMTRNPRFARQTQSVAELIDIMEQKAITVLPITDDDHRLVGLVHLHD LLGKGGVTFAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 6e-50 | 41 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-49 | 41 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 3e-49 | 41 |
