|
Name : DVU1399 (DVU1399) Accession : YP_010618.1 Strain : Desulfovibrio vulgaris Hildenborough Genome accession: NC_002937 Putative virulence/resistance : Unknown Product : ISDvu2, transposase OrfA Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2963 EC number : - Position : 1467861 - 1468259 bp Length : 399 bp Strand : - Note : identified by match to protein family HMM PF01527 DNA sequence : ATGTCCAGACAGAGTGCTAAAGAGATTTCCACGGTCGAGGTCGTGACCATGGTTCAACGTCGTCGTTGGACCATTGCCGA GAAGCTACGGGTAGTTGAAGAGTCGTCTTTACCCGGAATGAGCGTCTCCTTCGTGGCTCGCAAATACGGCATCGCTCCGA ATCTTGTCTTTCGATGGAGAAAGCTCATGAGCGATGGCGGAAAAGTGGCTATTCAGGCCGACGACCGAGTGGTGAGCGTG GCAGAGGCGAAGGCTTTGAAGAAGCGCATTCGGGATTTGGAACGGCTTCTCGGCCGAAAGACGATGGAAGTCGAAATCCT GAAGGAAGCTATCGACATTGCACGCGAAAAAAAACTGATCTCGCGTTCGCCGTTGCCATTCGAGGACGGTTCCCTATGA Protein sequence : MSRQSAKEISTVEVVTMVQRRRWTIAEKLRVVEESSLPGMSVSFVARKYGIAPNLVFRWRKLMSDGGKVAIQADDRVVSV AEAKALKKRIRDLERLLGRKTMEVEILKEAIDIAREKKLISRSPLPFEDGSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpG | AAD44740.1 | TnpG | Not tested | SHI-2 | Protein | 2e-21 | 46 |
| unnamed | AAL57520.1 | IS2 transposase | Not tested | LEE | Protein | 2e-21 | 46 |
| st02 | CAC81840.1 | ST02 protein | Not tested | LEE II | Protein | 2e-21 | 46 |
| ECO26_5247 | YP_003232129.1 | insertion sequence 2 OrfA protein | Not tested | LEE | Protein | 3e-21 | 46 |
| S3188 | NP_838471.2 | insertion sequence 2 OrfA protein | Not tested | SHI-1 | Protein | 3e-21 | 46 |
| S4060 | NP_839229.2 | insertion sequence 2 OrfA protein | Not tested | SHI-2 | Protein | 3e-21 | 46 |
| S4049 | NP_839217.2 | insertion sequence 2 OrfA protein | Not tested | SHI-2 | Protein | 1e-20 | 45 |
| aec50 | AAW51733.1 | Aec50 | Not tested | AGI-3 | Protein | 4e-21 | 45 |
| SF2984 | NP_708758.3 | IS2 ORF1 | Not tested | SHI-1 | Protein | 4e-21 | 44 |
| SF3709 | NP_709448.3 | IS2 ORF1 | Not tested | SHI-2 | Protein | 1e-20 | 43 |
| SF3722 | NP_709461.3 | IS2 ORF1 | Not tested | SHI-2 | Protein | 1e-20 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DVU1399 | YP_010618.1 | ISDvu2, transposase OrfA | VFG0648 | Protein | 1e-21 | 44 |
| DVU1399 | YP_010618.1 | ISDvu2, transposase OrfA | VFG0609 | Protein | 3e-21 | 43 |
| DVU1399 | YP_010618.1 | ISDvu2, transposase OrfA | VFG0622 | Protein | 3e-21 | 43 |
