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Name : tkt-1 (DET0644) Accession : YP_181386.1 Strain : Dehalococcoides ethenogenes 195 Genome accession: NC_002936 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 594702 - 596702 bp Length : 2001 bp Strand : - Note : identified by match to protein family HMM TIGR00232 DNA sequence : ATGTCAAATACAAAATCAGATAGTTTATGTATAAATGCCCTGCGCTTTCTTGCGGTAGACGCCGTTCAGAAGGCAAATTC GGGGCATCCCGGAGCACCTATGGGTATGGCCGCTATGGCCTATGCCCTGTGGCAAAATTTCCTCAAGCATAACCCCCAAG ACCCGGCCTGGCCTAACCGTGACCGTTTCATACTTTCTGCCGGCCATGCCTCAGCCTTGCTTTACTCACTTCTCCACCTT ACCGGTTATGATTTGCCGCTGGATGAGCTTAAAAATTTCCGCCAGTGGGGCAGTAAAACCCCGGGGCACCCGGAATACGG CCTGACCCCCGGCGTTGAGATGACTACCGGCCCGCTTGGGCAGGGTTTTGCCAGCGGTGTGGGTATGGCTATGGCCGAAG CCCATCTGGCCGCGGTTTTTAACCAGCCGGATTGCAAAATAATAGACCATTATACCTACGGCATAGTCTCTGACGGGGAT TTGATGGAGGGCGTAGCCTCGGAAGCCGCCTCTTTGGCGGGGCATTTGGCACTGGGTAAGCTGATTTACCTGTATGACGA TAATGAAATATCTATTGAAGGTTCAACAGAGCTGGCTTTTACCGAAAATACGGCTCTGCGTTTTGAAAGTTACGGCTGGC AGGTAATTGGCCCGGTAGACGGGCTTAACCCTGAGGCAGTTTCAGGGGCTATCAAAGAAGCCCAGTCAGATTCCGCCCGC CCCAGCCTGATTATCTGTAAAACAGTTATCGGTTTTGGCAGCCCGAACAAGGCCGGCAAGGCCTCTGCCCATGGTGAGCC GCTGGGAACAGACGAAGTGGCCAAAAGCCGCAAATCTTTAGGGTGGGATTACGAGCCTTTTGTAATACCGCCTGAAGCTC TGGCGGAATTCCGCATGGCACTGGATAAAGGCAAAACAGCCCAGCAGGTTTGGCAATCCAAGCTGGACTACTATTCAAGC CGTTATCCCGAAAAAGCCGCCCTTTTGCAGGACAGGCTTTCTGGTAAGCTGCCAGACAACTGGGATAATGAGCTGGATAA ACTTTTTGACAAGGCTATGGCCAGCCGCGAGGCTTCCGGTTTGATTATAAATACACTGGCTTCCCGCCTGCCAGCCCTTA TGGGCGGTTCGGCAGACCTCAGCCCGTCTAACAAAACTGTTATCAAAGACGGCGGCGAATATGAACCGCCGCATTATGAG GGGCGGAATATCCATTTCGGCGTACGTGAACACGCCATGGGAGCAATAGCCAACGGGCTGGCTCTCCACGGCGGGATTAT ACCTTATGTTGCCACTTTCCTTATATTTTATGATTACATGCGTCCGGCGGTAAGGCTGGCATCCCTTATGGGTCAAAGGG TTATTTATATTTTTACCCATGACTCTATCGGTCTGGGAGAGGACGGCCCTACCCACCAGCCTATTGAACAGCTGGCCGGT TTACGTTCGGTGCCCGGTCTGGTTACTATCCGCCCGGCAGATTCGTATGAAACAGCCCAGGCATGGAAAACGGCCATACT CCGCAAGGACGGCCCGACCGCCATTGCCCTCTCCCGCCAGAAACTGCCTCTCTTAGATAACTCACAGGCAAATTCCGTAA ACTTGGCCAAAGGGGCATATATACTGGCAGAAACAGATTCCCGCCCGCAGGTTGCCCTGGTAGCCAGCGGCTCAGAAGTA AGCATAGCCGTTCAGGCGGCTGAAATACTTAAAAATAAAGGCGTCTCGTCAAGGGTAGTATCCTTCCCTTCGTGGCAGCT TTTTGAGGCCCAACCCCGGACCTACCGCCAGAGCATCTTGCCCGCTTCCCTGCCGCGGGTAATAATAGAAGCCGGCAGTG CACAGGGATGGTGCAAATATTTGGGCGCAAACGGTGATATTATTTCCATTGACCATTTCGGGGCATCAGCCCCGGCGCCT GTGCTTTACCAACACTTTGGGCTAACCCCGGAAAATATGGCTGAAAAGGCTTTAAAGCTTTTGGAGAATGAAGATGAGTA A Protein sequence : MSNTKSDSLCINALRFLAVDAVQKANSGHPGAPMGMAAMAYALWQNFLKHNPQDPAWPNRDRFILSAGHASALLYSLLHL TGYDLPLDELKNFRQWGSKTPGHPEYGLTPGVEMTTGPLGQGFASGVGMAMAEAHLAAVFNQPDCKIIDHYTYGIVSDGD LMEGVASEAASLAGHLALGKLIYLYDDNEISIEGSTELAFTENTALRFESYGWQVIGPVDGLNPEAVSGAIKEAQSDSAR PSLIICKTVIGFGSPNKAGKASAHGEPLGTDEVAKSRKSLGWDYEPFVIPPEALAEFRMALDKGKTAQQVWQSKLDYYSS RYPEKAALLQDRLSGKLPDNWDNELDKLFDKAMASREASGLIINTLASRLPALMGGSADLSPSNKTVIKDGGEYEPPHYE GRNIHFGVREHAMGAIANGLALHGGIIPYVATFLIFYDYMRPAVRLASLMGQRVIYIFTHDSIGLGEDGPTHQPIEQLAG LRSVPGLVTIRPADSYETAQAWKTAILRKDGPTAIALSRQKLPLLDNSQANSVNLAKGAYILAETDSRPQVALVASGSEV SIAVQAAEILKNKGVSSRVVSFPSWQLFEAQPRTYRQSILPASLPRVIIEAGSAQGWCKYLGANGDIISIDHFGASAPAP VLYQHFGLTPENMAEKALKLLENEDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-144 | 54 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 3e-139 | 51 |
