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Name : serS (DET0577) Accession : YP_181319.1 Strain : Dehalococcoides ethenogenes 195 Genome accession: NC_002936 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 529182 - 530423 bp Length : 1242 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATTTGAAATTTATAAGAGAAAATACCGAACTAGTACGCAAAGCGGTAGCCGCCCGTAATACCGATGCCCCCAT TGATGAGATACTGGAGCTGGATAGTTGCCGCCGCACTCTCAGCCAGGAGCTGGATACCCTTCGCGCCAAACGCAAAATAA TAGCCAAGCAGCGGGATGAGGCCGCCATTGAAGAAGGGCGGGTATTACGCGGCAGGATAAGTGAACTTGAGACCGGGCTT TCAGAAGTAGAGGAAAAGCTGACTGACCGCTTGCTCAGGGTACCCAATATCCCGGATGCATCTGTACCTGTGGGCAAAGA CGAAAGCGAAAACGTAGTCCTTTATTACCGGGGAGAAAAACGTAATTTCAGCTTTACCCCCAAACCCCACTGGGAACTGG GAGAAGCGCTGGATATTATAGATTTTGACCGGGGTATCAAGCTTTCCGGTTCACGCTTTTATATTTTGAAGGGTGAGGGC GCGCGCCTTCAAAGGGCACTTATTGCCTTTATGCTGGACCTGCACACCCGCAAACACGGCTATACCGAAATCTACCCGCC CTACATGATAAAAAGGGAGTGTCTGGTAGCGTCTGGTAACCTGCCCAAATTTGCTGACAATTTGTACCATGACGCAGAGG AGGACTACTGGTGGGTGCCTACCGCCGAAGCCCCTCTGACTAATTTGCACCGTGACGAAATACTTTCTGTTGAGCAGCTG CCCATTCATTACGTAGCCTACACCGCCTGTTTCCGCCGCGAAAAAATGTCTGCCGGCAAAGATGTACGCGGTATAAAACG GCTGCACCAGTTTGACAAGGTTGAACTGTATAAATACTGCAAACCGGAAGACTCTTTTGACGAACTGGAAAAGATGGTGG CAGATGCTGAAGAAATAGCAGACGCCCTAAAGATACCCTACCGCTTAAAACAGCTGGTTACGGCTGATATCAGTTTCGGT TCAGCCAAGTCTTATGATATTGAAATGTATTCGCCGGGTGTTGACGAGTGGCTGGAAGTTTCTTCCTGTTCTAACTGCAC AGATTTTCAGGGCAGGCGGGCTAATGTCCGTTTCCGCCGCACCCCCGAAGCCAAACCCGAATTTGTCCACACCTTAAACG GCTCCGGGCTGGCCCTGCCCAGGGTGATGATATCGGTTATAGAAAACTACCAGCTGCCGGACGGAAGCATTGTTGTTCCC GAAGTACTCCGCCCCTTTATGGGAGTGGATGCTATCTGCTAA Protein sequence : MLDLKFIRENTELVRKAVAARNTDAPIDEILELDSCRRTLSQELDTLRAKRKIIAKQRDEAAIEEGRVLRGRISELETGL SEVEEKLTDRLLRVPNIPDASVPVGKDESENVVLYYRGEKRNFSFTPKPHWELGEALDIIDFDRGIKLSGSRFYILKGEG ARLQRALIAFMLDLHTRKHGYTEIYPPYMIKRECLVASGNLPKFADNLYHDAEEDYWWVPTAEAPLTNLHRDEILSVEQL PIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFDELEKMVADAEEIADALKIPYRLKQLVTADISFG SAKSYDIEMYSPGVDEWLEVSSCSNCTDFQGRRANVRFRRTPEAKPEFVHTLNGSGLALPRVMISVIENYQLPDGSIVVP EVLRPFMGVDAIC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-92 | 46 |
