Gene Information

Name : DET0135 (DET0135)
Accession : YP_180885.1
Strain : Dehalococcoides ethenogenes 195
Genome accession: NC_002936
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 132882 - 133574 bp
Length : 693 bp
Strand : +
Note : identified by similarity to GB:BAA02453.1

DNA sequence : 
ATGCCTGAGCATAAAATACTGGTAGTTGAAGATGACGCCACCTTGCGTGAGCTTTTGTGTTACAACCTTGCCAAGGAGGG
ATACCAGCTGGAATGTGCTGAAGACGGGCTTAAGGCGCTTGGTATGTACCGCCGGTTTAAGCCGTCTTTGGTTATACTGG
ACGTAATGCTGCCGGGCATGGACGGCTTTGAACTTTGCCGCCTTATCCGCGCTGAGAGCAGCGTGCCCATACTTATGCTG
ACCGCCCGTTCAAGCGAAACAGATAAAGTAAACGGGCTGGAAGTGGGGGCGGATGATTATCTGTCCAAACCCTTTGGCAT
GAAGGAACTGCTGGCCAGAATGAGGGCACTCCTCCGCCGCAGTCAGATGCAGAACTCCCAGCCAGAGCCTGTGAGCGGCC
TGAAAATAGATAATCTGGAAATATTTTTTGAACGTCATCTGGTCATGCGGGACGGGGAGGCTTTAGACTTTTCCCCGAAG
GAGTTTGACCTGCTGAGTTTTATGGTTCAGAACCGGTGCCGGGTTTTCAGCCGCGAACAGCTGCTGGAAAAGGTTTGGGG
TTATGATTATCCGGGCGGTACCCGCACGGTTGATGTACATATCAGCTGGCTGCGCCAGAAAATAGAGACTGACCCGTCCC
GTCCCCGCCACCTGATAACAGTGCGGGGAACCGGCTATAAGTTTGAGGAGTAA

Protein sequence : 
MPEHKILVVEDDATLRELLCYNLAKEGYQLECAEDGLKALGMYRRFKPSLVILDVMLPGMDGFELCRLIRAESSVPILML
TARSSETDKVNGLEVGADDYLSKPFGMKELLARMRALLRRSQMQNSQPEPVSGLKIDNLEIFFERHLVMRDGEALDFSPK
EFDLLSFMVQNRCRVFSREQLLEKVWGYDYPGGTRTVDVHISWLRQKIETDPSRPRHLITVRGTGYKFEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-31 44
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DET0135 YP_180885.1 DNA-binding response regulator AE000516.2.gene3505. Protein 2e-47 47
DET0135 YP_180885.1 DNA-binding response regulator NC_002952.2859905.p0 Protein 6e-45 46
DET0135 YP_180885.1 DNA-binding response regulator NC_003923.1003749.p0 Protein 5e-45 46
DET0135 YP_180885.1 DNA-binding response regulator NC_009641.5332272.p0 Protein 6e-45 46
DET0135 YP_180885.1 DNA-binding response regulator NC_013450.8614421.p0 Protein 6e-45 46
DET0135 YP_180885.1 DNA-binding response regulator NC_007793.3914279.p0 Protein 6e-45 46
DET0135 YP_180885.1 DNA-binding response regulator NC_007622.3794472.p0 Protein 5e-45 46
DET0135 YP_180885.1 DNA-binding response regulator NC_002745.1124361.p0 Protein 6e-45 46
DET0135 YP_180885.1 DNA-binding response regulator NC_009782.5559369.p0 Protein 6e-45 46
DET0135 YP_180885.1 DNA-binding response regulator NC_002951.3237708.p0 Protein 6e-45 46
DET0135 YP_180885.1 DNA-binding response regulator NC_002758.1121668.p0 Protein 6e-45 46
DET0135 YP_180885.1 DNA-binding response regulator HE999704.1.gene2815. Protein 1e-44 46
DET0135 YP_180885.1 DNA-binding response regulator NC_012469.1.7685629. Protein 3e-43 45
DET0135 YP_180885.1 DNA-binding response regulator AE016830.1.gene1681. Protein 4e-44 44
DET0135 YP_180885.1 DNA-binding response regulator HE999704.1.gene1528. Protein 5e-31 42
DET0135 YP_180885.1 DNA-binding response regulator CP000647.1.gene4257. Protein 1e-20 41
DET0135 YP_180885.1 DNA-binding response regulator CP001138.1.gene4273. Protein 5e-21 41
DET0135 YP_180885.1 DNA-binding response regulator BAC0533 Protein 1e-20 41
DET0135 YP_180885.1 DNA-binding response regulator CP000647.1.gene2531. Protein 5e-26 41
DET0135 YP_180885.1 DNA-binding response regulator BAC0596 Protein 2e-26 41
DET0135 YP_180885.1 DNA-binding response regulator CP001138.1.gene2239. Protein 2e-26 41
DET0135 YP_180885.1 DNA-binding response regulator CP001918.1.gene5135. Protein 2e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DET0135 YP_180885.1 DNA-binding response regulator VFG1563 Protein 5e-32 44
DET0135 YP_180885.1 DNA-binding response regulator VFG1390 Protein 3e-35 43
DET0135 YP_180885.1 DNA-binding response regulator VFG1702 Protein 9e-32 43
DET0135 YP_180885.1 DNA-binding response regulator VFG1386 Protein 1e-34 43