Gene Information

Name : DET1338 (DET1338)
Accession : YP_182049.1
Strain : Dehalococcoides ethenogenes 195
Genome accession: NC_002936
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1210179 - 1210388 bp
Length : 210 bp
Strand : +
Note : identified by similarity to OMNI:MJ0272

DNA sequence :
ATGCAAAATAAACTCCGGGTTTTAAGAGCCATACACAACCTTACTCAGGAGGAACTGGCGGACAAACTGGGTATAACCCG
CCAGACCGTTATCGCTATAGAGTGGGGAAAGTACTCCCCCTCCCTGGAGCTGGCTTTCAAGATAGCTTCCCTTTTCAAAG
CACCAATAGAAGAAATATTTACATACAATACTGAACAGGAAAGGCAATGA

Protein sequence :
MQNKLRVLRAIHNLTQEELADKLGITRQTVIAIEWGKYSPSLELAFKIASLFKAPIEEIFTYNTEQERQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-08 47
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 6e-08 47
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-10 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DET1338 YP_182049.1 DNA-binding protein VFG2168 Protein 2e-08 47
DET1338 YP_182049.1 DNA-binding protein VFG2175 Protein 2e-08 47