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Name : ribD (DET1190) Accession : YP_181903.1 Strain : Dehalococcoides ethenogenes 195 Genome accession: NC_002936 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : - Position : 1085455 - 1086552 bp Length : 1098 bp Strand : - Note : identified by match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326 DNA sequence : ATGAAATATATGTCTCAGGCTTTGTCGCTTGCCAAGCTGGCTATAGGTCAGGTCAGTCCTAACCCGGCGGTGGGGGCTGT CATTGTAAAAAACGGCGAAGTGGTCGGTCAGGGCTTTACCCAGCCGCCCGGCGGTGACCACGCTGAGATAGTAGCTTTGA AGCAGGCTGCCGAAAAGGCCAAAGGGGCTGCTTTATATGTGACTTTAGAGCCGTGCTGCCACCAGGGGCGGACCCCGCCC TGCACTGTGGCTATTATAGAATCAGGCATCAAAGAGGTTTATATTGCCACCCTGGATGATAATCCCTTAGTTTCCGGCAA GGGCAAGAAAGAGCTGGAAGATGCCGGTATAAAGGTTCATCTGGGCATGATGGAGCGTGAAGCCCGCCAGATGAATGAAG CCTATTTCAAGTATATTACCACCGGCATGCCCTTTGTGACTGCCAAATACGCCATGAGCCTTGACGGCAAAACGGGTACC CGCACCGGTGATTCCAAGTGGATTTCCAACGAGGAATCCCGTCATTTTGCCCATTATATCCGCCATATATCAGATGTGAT TATGGCCGGGCTTAATACTATCCTCAAAGATGACCCCCACCTGACAGCCAGAGTAAACTGCGGGCGGGGCGGTACTTCAC ATTGCCAGCCCACCAGAGTAATTATTGATGATAACGGCCGGGCACCTTTGAGTTCCAACGTTTTTCATGTTCCCGGCAAT ACCATTGTAGCTGTAGCCAAAGGGCTTACCCCCGAAGAGAAACAGGCGTATGATGAGGTCGGGGCAAAAGTGGTGGAAAT GCCGGATGAACGGGGGCTGGTAGACTTAAAATCCCTGCTGCGTTATCTGGGGCAAAACGGGGTAACCAGTGTGCTGGTAG AGGGCGGCGGCATTGTGCTGGGTTCGCTTTTTGACCTTAAACTGGTGGACAAGGTTTTGGTATTTGTCGCCCCCATAATA ATAGGCGGCAAGGACGCTAAAATACCGGTTGCGGGTTTGGGGGCGGAGCTGATTACAGACTCAGCCAAGCTTCGGGATAT TACCACTACCGCATTCGGACAGGACGTGTTGATTTCCGGTTACGTTATTAAGGAGTAA Protein sequence : MKYMSQALSLAKLAIGQVSPNPAVGAVIVKNGEVVGQGFTQPPGGDHAEIVALKQAAEKAKGAALYVTLEPCCHQGRTPP CTVAIIESGIKEVYIATLDDNPLVSGKGKKELEDAGIKVHLGMMEREARQMNEAYFKYITTGMPFVTAKYAMSLDGKTGT RTGDSKWISNEESRHFAHYIRHISDVIMAGLNTILKDDPHLTARVNCGRGGTSHCQPTRVIIDDNGRAPLSSNVFHVPGN TIVAVAKGLTPEEKQAYDEVGAKVVEMPDERGLVDLKSLLRYLGQNGVTSVLVEGGGIVLGSLFDLKLVDKVLVFVAPII IGGKDAKIPVAGLGAELITDSAKLRDITTTAFGQDVLISGYVIKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 1e-42 | 41 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 1e-42 | 41 |
