Gene Information

Name : DIP0448 (DIP0448)
Accession : NP_938829.1
Strain : Corynebacterium diphtheriae NCTC13129
Genome accession: NC_002935
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 417620 - 418336 bp
Length : 717 bp
Strand : -
Note : Similar to Streptomyces coelicolor ABC transport system ATP-binding protein SCE41.20c TR:Q9F2N9 (EMBL:AL442120) (262 aa) fasta scores: E(): 2.4e-29, 44.49% id in 236 aa

DNA sequence : 
ATGACAGCACTCATCGCAGCCACCGGAGTGAAGAAAAGCTTCGGTAAAGGTAGTCAGAAAGTAACAGTTCTCAAGGGAAT
TGATCTCACTATTTTACCTGGAGAATCTGTTGCAATTGTCGGAAAATCTGGTTCAGGAAAATCTACATTACTGTACTGCT
TAAGTGGATTACTCGCACCCGATGAAGGATCTATCTACCTAGCCAATCAGAACATCACCGCCACCTCGCCACGAAAAGTC
GCTGAGATCAGGAGAAATCACGCAAGTTTCATTTTTCAAGACTTAAACCTCATTAGCTCCCTGACGGTCGCCGACAACAT
CCGGCTTCCTTCAAAGCTTGCTGGCCGAAACCCCAAAAAACACGAAATCGACTCAGTTCTTGAAAAAGTGGGGCTGTCAG
GAGCTGGCAATAAATATCCAAACCAATTATCCGGAGGACAACAGCAACGCGTAGCTATCGCACGTTCTCTTGTCAGATCT
CCCCAGATACTCTTTGCCGACGAACCGACCGGAGCACTAGACGTTACAACCAGCGCAATTATCCTAAAACTACTTCAAGA
AACGGTCACCAAGAGAACTTCTCTAGTTATGGTCACACATGATCTGGATATTGCAGCATCAGCTGACCGTGTTGTGGTGC
TAAAAGAAGGAAACACAGGTCAAATTCTCCATCACACAACACCAACAAACATATTTGATGCTATGCATAAGAGTTAG

Protein sequence : 
MTALIAATGVKKSFGKGSQKVTVLKGIDLTILPGESVAIVGKSGSGKSTLLYCLSGLLAPDEGSIYLANQNITATSPRKV
AEIRRNHASFIFQDLNLISSLTVADNIRLPSKLAGRNPKKHEIDSVLEKVGLSGAGNKYPNQLSGGQQQRVAIARSLVRS
PQILFADEPTGALDVTTSAIILKLLQETVTKRTSLVMVTHDLDIAASADRVVVLKEGNTGQILHHTTPTNIFDAMHKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-78 78
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-86 76
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-86 76
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-86 76

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DIP0448 NP_938829.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-38 42
DIP0448 NP_938829.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-33 41
DIP0448 NP_938829.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-31 41